Desmodus rotundus (common vampire bat): 112322279
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Entry
112322279 CDS
T05907
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112322279 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dro03041
]
112322279 (PRPF40A)
Spliceosome [BR:
dro03041
]
Complex A
U1 snRNP components
U1 related factors
112322279 (PRPF40A)
Complex B
112322279 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
DUF5803
Motif
Other DBs
NCBI-GeneID:
112322279
NCBI-ProteinID:
XP_024435667
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MQATPSEAEAGGESPQSCVSEAHSDWTAGKPVSLLAPLIPPRSAGQPLTFSPGGRQPLRS
LLVGICSGSGRRRSSLSQTMRPGTGAERGGLMVSEMESHPPSRGPGDGERRLSSSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTSGAKSMWTEHKSPDGRTYYYNTE
TKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQ
NTIVAGSLITKSNLHAMIKAEESSKQEECTTASTAPVPTTEIPTTMSTMAAAEAAAAVVA
AAAAAAAAANANASTSASNTVSGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTST
PAIQDQSVEVSSNAGEETSKETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKE
KRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKES
FQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQL
RKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIR
ALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRF
TNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAI
ISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIE
LDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHH
RKRSRSRSGSDSDDDDSHTKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHK
SDSPESDAEREKDKKDKDRESEKDRTRQRSESKHKSPKKKTGKDSSGNWDTSGSELSEGE
LEKRRRTLLEQLDDDQ
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccaagtgaggctgaggctgggggcgaatcgccgcagagctgcgtgtcg
gaagcgcactctgattggacagcggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagtgccgggcagcctttaacctttagcccgggcgggcgccagccactcagatct
cttcttgttggtatatgcagcggcagtggccgccggcggagcagtctgagccagacgatg
aggccagggacgggagccgagcgtggaggcctcatggtgagtgaaatggagagccatcct
ccttcgcggggtcctggggacggggagcggagattgtccagctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcatcctggcatg
cattatgccccaatgggaatgcacccaatgggtcagagagcgaatatgcctcctgtacct
catgggatgatgccacaaatgatgcccccaatgggaggtccgccaatgggtcaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttctatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtacatcaggcgca
aaatcaatgtggactgaacataagtcacctgatggaaggacttattactacaatactgaa
acaaaacagtcgacttgggagaaaccagatgatcttaaaacacctgctgagcaactttta
tctaaatgcccctggaaagagtacaaatctgactctggaaagccatactattacaattct
caaacaaaagaatcccgttgggccaaacctaaagaacttgaggatcttgaaggataccag
aataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagct
gaagaaagcagtaagcaagaagagtgcaccacagcatcaacagccccagttcctacaaca
gagattccgaccacaatgagcaccatggctgctgcagaggcagcagctgctgttgtcgca
gctgctgctgctgctgccgctgccgccaatgccaatgcctccacctctgcttctaatact
gtcagtggaactgttccagttgttcctgagcctgaagttacttcaattgttgctactgtt
gtagataatgaaaacacagtaacaatttcaactgaagaacaagcacaacttactagtacc
cctgctattcaggatcaaagtgttgaagtgtccagtaatgctggagaagagacatccaag
gaaactgtagccgattttactcccaaaaaagaagaggaagaaagccaaccagcaaaaaaa
acatatacttggaatacaaaggaggaggcaaagcaagcatttaaagaattattgaaagaa
aagcgggtaccatctaatgcttcatgggagcaagctatgaaaatgatcataaatgatcca
cgatacagtgctttagcaaagttgagcgaaaaaaagcaggcctttaatgcctataaagtt
cagacggagaaagaagaaaaagaagaagcaagatcgaagtacaaagaagctaaggaatcc
tttcagcgttttcttgaaaatcatgagaaaatgacatccacaaccagatacaaaaaagca
gagcaaatgtttggtgagatggaagtctggaatgcaatatcggaacgtgaccgtcttgaa
atctatgaagatgttttattctttctttcaaagaaggaaaaggaacaagcaaagcagttg
cgaaagagaaattgggaagccttaaaaaacatacttgacaacatggctaatgtaacatat
tctactacctggtcagaagcccagcagtatctcatggataatccaacttttgcagaagat
gaggaattacagaacatggataaagaagatgcattaatttgctttgaagagcatatccgg
gctttagaaaaggaagaagaagaagaaaaacagaagagtttgctgagagaacggagacga
cagcgtaaaaacagagaatcttttcagatatttttagatgaactgcatgaacatggacaa
ctgcattctatgtcatcttggatggaattgtatccaacaattagttctgatattagattc
actaatatgcttggtcagccggttttttcattaggatcaactgcacttgaccttttcaag
ttttatgttgaggatctaaaagcacgctatcatgatgagaagaagataataaaagacatt
ctaaaggataaaggatttgtagttgaagtaaatactacttttgaagactttgtggcaata
atcagttcaactaaaagatcaaccacattagatgctggaaatattaagttggcttttaat
agtttacttgaaaaggcagaagcccgtgaacgtgaaagagaaaaagaggaggctcgaaag
atgaaacgaaaagaatctgcatttaagagtatgttgaaacaagctactcctccaatagaa
ttggatgctgtctgggaagatatccgggagagatttgtaaaagagccagcatttgaggac
ataactctagagtctgaaagaaaacgaatatttaaagattttatgcatgtacttgagcat
gaatgtcaacatcatcattcaaagaacaagaaacattctaaaaaatccaaaaaacaccac
aggaaacgttcccgctctcgatcggggtcagattccgatgacgacgacagccatacaaag
aaaaaaagacaacgatcagagtctcgttctgcttcagaacattcttctagtgctgagtct
gagagaagttacaagaagtcaaaaaaacataagaagaaaagcaagaagaggagacataaa
tctgactctccagagtcagatgctgagcgagagaaagataaaaaagacaaagaccgggaa
agtgaaaaagacagaactagacaaagatctgaatcaaaacacaaatcacctaagaaaaag
actggaaaggattcttctggtaattgggatacttctggcagtgaactgagtgaaggggaa
ttggaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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integrated database retrieval system
