Dactylosporangium roseum: Drose_09335
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Entry
Drose_09335 CDS
T08480
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
dros
Dactylosporangium roseum
Brite
KEGG Orthology (KO) [BR:
dros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dros03019
]
Drose_09335 (hrpA)
Enzymes [BR:
dros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Drose_09335 (hrpA)
Messenger RNA biogenesis [BR:
dros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Drose_09335 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
AAA_19
HA2_N
NACHT
T2SSE
nSTAND3
AAA_16
AAA_30
ResIII
AAA_23
SLFN-g3_helicase
PhoH
Helicase_RecD
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UWZ38418
LinkDB
All DBs
Position
1861807..1865934
Genome browser
AA seq
1375 aa
AA seq
DB search
MSEVPRHTGPSRPGRPNKAAARSQSGTADKPGAHGRAGGSGHSSGHSTTSGHPGARGQAG
RGRGQTGAPGQPGALSQADAAAHSRTLSELRARLAGLMPLDQHRLRRRIDGAKKSHHVQA
IAEAIRADVERAEQRVAARRAAVPEVSYPEPLPVSQRKDEILAAIRDHQVVIVAGETGSG
KTTQLPKICLELGRGVTGQIGHTQPRRIAARTVAERVAEELGTQLGETVGFKVRFSDQSG
DQTMIKVMTDGILLAEMQQDRLLRQYDTLIIDEAHERSLNIDFILGYLKQLLPRRPDLKI
IITSATIDPERFSRHFGDAPIVEVSGRTYPVEVRYRPIEAPDKGIGDGEDDVDQFDAICD
AVQELQAEGPGDVLVFLSGEREIRDTADALARLDLPNTEILPLFARLSFAEQHRVFQPHA
GRRIVLATNVAETSLTVPGIKYVVDPGTARISRYSHRLKVQRLPIEPISQASANQRKGRC
GRTSDGICIRLYSEEDFEARPEFTDPEILRTNLASVILQMISLGLGDLAAFPFIDPPDRR
NVTAGVQLLEELGALEGGGGADGRRLTPLGRRLSQLPVDPRLARMVLEAERNGCVREVMV
ITAALSIQDPRERPADKQAQAQQSHARFADKDSDFVGYLNLWNYLREKQQELSSNQFRKL
CRAEFLNYLRVREWQDIFGQLRSVLRTMDVAVNEEPASPYQIHVSLLSGLLSHVGLKDAE
KNEYLGARGARFAVFPGSALFRKTPRWVMAAELVETTRLWARVAARIEPEWIEPLAEHLV
KRNYSEPHWEKKAAAVMAMEKVTLYGVPIVSSRKVNYGRIDPVLSRELFIRHALVEGDWE
TQHAFFAENRRLLDEVEELENRARRRDILVDDETLFEFYDQRIAPEVVSGRHFDSWWKQT
RRDQPDLLTFDPAMLVNAGADAVRQEQYPDAWEQDGQRFRLTYQFEPGTDADGVTVHIGL
PVLARVRDADLSWQVPGLREELVTSLIKSLPKALRRNFVPAPDTARDVLAGMPVREGHLL
EALERELRRLTGVTVPRAAWDWSRVPEHLKMTFRIVDDAGAVLAEGKNLEDLRARLAPKV
EETVAEAAVDVTRSGLTSWDFGELPRTLSRKVAGHTLTVYPALVDEGTSVAIKAFDLPAR
QQLEMWAGTRRLLLLTLPPAAKFVQGRLSNEAKLALSRNPHRNAVDLLDDCAACAVDQLM
SDAGGPAWDAAGFTALRDRVRADLVDLTLDVVGSVRKILAAAYDVEQRLARTKNPLLLPA
LTDMRQQLAKLVYRGFVTDTGWQRLPDLERYLRGIERRLDKVPTDPARDRDRMLTVQEVR
REYDELAAGMTMSPKLREIRWMIEELRVGLFAQALGTAYPVSDVRIYRAMDALSD
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggtgccccgacacaccggcccgagccgccccggtaggccgaacaaggccgcc
gcgcggagccagtccggcacggcggacaagcccggtgcgcacggtcgcgccggcggttcc
ggccattccagcggccactccaccacatccggtcacccgggcgcgcgcggccaggccggc
cgcggacggggtcagaccggcgcaccgggtcaaccgggcgctctgagccaggccgacgcg
gccgcccactcccgcacgttgagcgagctgcgggcccggctggccggcctgatgccgctg
gaccagcaccggctgcgccggcggatcgacggggcgaagaagtcgcaccacgtgcaggcc
atcgccgaggcgatccgtgccgacgtggagcgggccgagcagcgggtcgccgcccgccgg
gccgccgtgcccgaggtgagctatcccgagccgctgccggtcagccagcgcaaggacgag
atcctggcggcgatccgggaccaccaggtcgtgatcgtcgcgggcgagaccggctcgggc
aagacgacgcagcttccgaagatctgcctggagctggggcggggcgtgacggggcagatc
ggccacacgcagccgcgccggatcgccgcccgtaccgtcgcggagcgggtcgccgaggaa
ctgggcacccaactgggtgagaccgtcgggttcaaggtgcggttctcggaccagtccggc
gaccagacgatgatcaaggtgatgacggacggcatcctgctcgccgagatgcagcaggat
cggctgctccgccagtacgacaccctgatcatcgacgaggcgcacgagcgcagcctcaac
atcgacttcatcctcgggtacctcaagcagttgctgccgcgccgccccgatctcaagatc
attatcacctcggcgacgatcgaccccgagcggttctcccgccacttcggcgacgccccg
atcgtggaggtgtccggccgcacgtatccggtggaggtccggtaccggccgatcgaggcg
cccgacaaaggcatcggggacggcgaggacgacgtcgaccagttcgacgccatctgcgac
gccgtccaggagttgcaggccgaggggccgggcgacgttctggtgttcctcagcggtgag
cgggagatccgcgacaccgccgacgccctggcccgcctcgacctgcccaacaccgagatc
ctgccgctgttcgcgcggctgtcgttcgccgagcagcaccgggtcttccagccgcacgcc
gggcgccggatcgtgctggccacgaacgtggcggagacgtcgctgacggttccgggcatc
aagtacgtggtcgatcccggcacggcgcggatctcgcggtacagccaccgcctgaaggtg
cagcggctgccgatcgagccgatctcgcaggcgtcggcgaaccagcggaagggccgctgc
gggcgcacctccgacggcatctgcatccgcctctacagcgaagaggacttcgaggcccgc
ccggagttcaccgacccggagattctccgcacgaacctggcctcggtcatcctgcagatg
atctcgttgggcctcggcgacctggccgcgttcccgttcatcgacccgccggaccgccgc
aacgtcaccgccggcgtgcaactgctcgaagagctgggcgcgctggagggcggcggcggt
gcggacggccggcgcctgaccccgctgggccggcggctgtcgcaactgccggtcgacccg
cggctggcccgcatggtgctggaggcggagcgcaacggctgtgtccgcgaggtcatggtc
atcacggcggcgctgtcgatccaggatccgcgggagcgcccggcggacaagcaggcccag
gcgcagcagtcgcacgcccgcttcgccgacaaggactccgacttcgtcggctacctgaac
ctgtggaactacctgcgggagaaacagcaggagctgtccagcaaccagttccgcaagctg
tgccgggccgagttcctcaactacctgcgggtccgcgagtggcaggacatcttcggccag
cttcgctcggtgttgcggaccatggacgtggcggtgaacgaggagccggcttcgccgtac
cagatccacgtctcgctgctgtcgggcctgttgtcgcacgtcgggctcaaggacgccgag
aagaacgagtacctcggcgcgcgcggggcgcggttcgcggtgttccccggctcggcgctg
ttccgcaagacgccccgctgggtgatggccgcggagctggtggagacgacccggctgtgg
gcgcgggtcgcggcccggatcgagccggagtggatcgagccgctggccgagcacctggtg
aagcgcaactacagcgagccgcactgggagaagaaggccgccgcggtcatggcgatggag
aaggtgacgctgtacggcgtgccgatcgtctcctcgcggaaggtcaactacggccggatc
gacccggtgctgtcccgggagctgttcatccggcacgcgctcgtcgagggcgactgggag
acccagcacgcgttcttcgccgagaaccggcgactcctcgacgaggtcgaggagctggag
aaccgggcccgccgccgggacatcctggtcgatgacgagacgctgttcgagttctacgac
cagcggatcgcgccggaggtcgtctccggccggcacttcgacagttggtggaagcagacc
cgccgcgaccagccggacctgctgaccttcgacccggcgatgctcgtgaacgcgggcgcc
gacgcggtacggcaggagcagtacccggacgcctgggagcaggacgggcagcggttccgg
ttgacgtaccagttcgagccgggcaccgacgcggacggcgtcaccgtccacatcgggctg
ccggtgctggcccgggtgcgggacgccgacctgagctggcaggtcccgggcctgcgcgag
gagctggtgacgtcgctcatcaagtcgctgccgaaggcgctgcgccgcaacttcgtcccc
gccccggacaccgctcgtgacgtgctggccggcatgccggtccgcgaggggcacctgctg
gaggcgctggagcgggagctgcgccgcctgaccggtgtcacggtgccgcgtgcggcgtgg
gactggagccgcgtcccggaacacctgaagatgacgttccggatcgtcgacgacgccggt
gccgtgctcgcggagggcaagaacctcgaggacctgcgggcccggctggccccgaaggtc
gaggagaccgtcgccgaggcggccgtcgacgtgacccgcagcggcctgacctcctgggac
ttcggcgagttgccgcggaccctgtcccggaaggtggccgggcacacgctgacggtgtat
ccggcactcgtcgacgagggcacctcggtcgcgatcaaggcgttcgacctgcccgcccgc
cagcagctcgagatgtgggccgggacccgccgcctgctgttgctgaccctgcccccggcg
gcgaagttcgtccagggccggctctccaacgaggcgaagctggcgctgagccgcaacccg
caccgcaatgccgtcgacctgctcgatgactgcgccgcgtgcgccgtcgaccagctcatg
agcgacgccggcggaccggcgtgggacgcggcggggttcacggcgctgcgtgaccgcgtc
cgggccgacctggtcgatctgacgctcgacgtcgtcggcagcgtgcggaagatcctggcc
gccgcgtacgacgtggagcagcgcctcgcccgcaccaagaacccgctgctgctaccggcg
ctgaccgacatgcgccagcagttggcgaagctggtgtaccgcgggttcgtcaccgacacc
ggctggcagcgcctgccggacctggagcgctacctgcgcggcatcgaacggcgcctcgac
aaggtgccgaccgacccggcccgcgaccgggaccggatgctcaccgtgcaggaggtgcgg
cgggagtacgacgagctggcggccggcatgacgatgtcgccgaagctgcgcgagatccgc
tggatgatcgaggaactgcgggtgggcctgttcgcccaggcgctcggcaccgcatacccg
gtctccgacgtgcgcatctaccgggcgatggacgcgctctccgactga
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