Dactylosporangium roseum: Drose_11405
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Entry
Drose_11405 CDS
T08480
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dros
Dactylosporangium roseum
Pathway
dros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Drose_11405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dros03019
]
Drose_11405
03009 Ribosome biogenesis [BR:
dros03009
]
Drose_11405
Enzymes [BR:
dros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Drose_11405
Messenger RNA biogenesis [BR:
dros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Drose_11405
Ribosome biogenesis [BR:
dros03009
]
Prokaryotic type
rRNA helicases
Drose_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UWZ40329
LinkDB
All DBs
Position
2291570..2293258
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AA seq
562 aa
AA seq
DB search
MAGFADLGLRDELLKALTGLGYEEPTPIQREAIPPMLAGRDLLGQAATGTGKTAAFALPL
LQRMPPPGGDNPSALVLVPTRELAVQVSEAIHRYGRDLGTRVLPIYGGQPIGRQLRALEQ
GVDVVVATPGRALDHLGRGTLRLHDLRVVVLDEADEMLDMGFAEDIEAILQETPEDRQTV
LFSATMPPRIDGLARSHLTDPVRIQIGREPTPAGEAPLVRQVAYVVTRAHKPAALGRVLD
VEAPGAAIVFCRTRDEVDQLTETLNGRGYRAEALHGGMGQEQRDRVMARLRNGTADLLVA
TDVAARGLDVEHLTHVVNYDVPSAPESYVHRIGRVGRAGREGVAITLAEPREHRMLKTIE
RITKQRIVIEKVPTVADLRARRLELTRAALQESLLADKGLERFRVVVDTLAEEFDLVEIA
LAAVKLAHESGGVGDGDQEEIPEVTIRPPRERDGERPGRRVSVRDADGRGRGRDGGRRTP
PGGMTRLFVGAGRSAGIRPQDLVGAITGESSLTGRDVGAIEITDRFSLVEIPEQSVDEVI
DTLRRTTLKGRRPVVRRERSRP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccggcttcgccgacctcggcctgcgggacgagttgctcaaggcgctcacgggactc
ggctacgaggagccgaccccgatccagcgcgaggccatcccgccgatgctcgccggccgc
gacctgctcggccaggcggcgaccggcaccgggaagacggccgcgttcgcgctgccgctg
ctgcagcgcatgccgccgcccggcggtgacaacccgtcggccctggtcctggtgccgacc
cgcgagctggcggtccaggtgtcggaggccatccaccggtacgggcgggacctgggcacc
cgcgtcctgccgatctacggcgggcagccgatcggccgccagcttcgggcgctggagcag
ggcgtcgacgtggtcgtcgcgacccccggccgggcgctggaccacctcggccgcggcacc
ctgcgcctgcacgacctgcgcgtggtggtgctcgacgaggccgacgagatgctcgacatg
ggcttcgccgaggacatcgaggcgatcctccaggagaccccggaggaccgtcagacggtg
ctgttctccgcgacgatgccgccccgcatcgacggcctggcccgcagccacctcaccgac
ccggtccggatccagatcggccgcgagcccactcccgcgggtgaggcgccgctggtccgg
caggtcgcctacgtcgtgacccgcgcgcacaagcccgccgccctcggccgggtgctcgac
gtcgaggcgcccggcgcggcgatcgtgttctgccgcacccgcgacgaggtcgaccagctc
accgagacgctcaacggccggggataccgcgccgaggcgctgcacggcggcatgggccag
gagcagcgcgaccgggtgatggcgcggctgcgcaacggcaccgccgacctgctcgtcgcc
accgacgtcgccgcccgcggcctcgacgtcgagcacctgacgcacgtggtcaactacgac
gtgccgtcggccccggagtcgtacgtgcaccgcatcggccgggtcggccgcgccggccgt
gagggtgtggccatcaccctcgccgagccgcgcgaacaccgcatgctcaagacgatcgag
cggatcaccaagcagcgcatcgtgatcgagaaggtgccgacggtcgccgacctgcgggcc
cgccgcctggagttgacccgggccgccctgcaggagagcctcctggccgacaagggcctg
gagcggttccgggtggtcgtcgacacgctcgccgaggagttcgacctggtggagatcgcg
ctggcggcggtgaagctggcgcacgagtcgggcggggtcggcgacggcgaccaggaggag
atcccggaggtcaccatccgtccgccgcgcgagcgggacggtgagcggccgggccggcgg
gtcagcgtccgcgacgccgacgggcgtggccgcggccgggacggcgggcggcggaccccg
ccgggcggcatgacccggctgttcgtcggtgccggccgcagcgcgggcatccggccgcag
gacctcgtgggcgcgatcaccggcgagtcgagcctcaccggccgcgacgtcggcgcgatc
gagatcaccgaccggttctcgctggtcgagatcccggagcagtcggtcgacgaagtcatc
gacacgctgcggcgcacgacgctgaagggccgccgcccggtggttcgccgcgagcgcagc
cgcccctaa
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