Dactylosporangium roseum: Drose_34615
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Entry
Drose_34615 CDS
T08480
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dros
Dactylosporangium roseum
Pathway
dros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Drose_34615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dros03019
]
Drose_34615
03400 DNA repair and recombination proteins [BR:
dros03400
]
Drose_34615
Enzymes [BR:
dros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Drose_34615
Messenger RNA biogenesis [BR:
dros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Drose_34615
DNA repair and recombination proteins [BR:
dros03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Drose_34615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
PglZ_C
Pribosyltran
DUF8096
Motif
Other DBs
NCBI-ProteinID:
UWZ40762
UniProt:
A0ABY5ZH44
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All DBs
Position
7418243..7420339
Genome browser
AA seq
698 aa
AA seq
DB search
MGVRQEASVVLKKLAGPSAELREDQWVAIEALVGRGRRVLCVQRTGWGKSAVYFVATALL
RARGAGPTVIVSPLLALMRNQVDAAARAGITARTINSANLEEWDEITAEITAGAVDVLLV
SPERLNNPDFRDNVLPKLAATTGLLVVDEAHCVSDWGHDFRPDYRRLRTLLLDLAPGTPV
LATTATANARVTEDVAEQLGDALVLRGSLDRESLRLGSLTLPSAAHRLAWLADHLRDLPG
SGIIYTLTVAGAHEAAAYLRGQGYEVAAYTGQSEDSDRRAAEADLLDNRIKALVATSALG
MGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRAVRKADVLLLPGTEDAAIWRYFASLAFP
PEEQVRAVLDVLAAADRPLSTAALEPRVELRRNRLELMLKVLDVDGAVRRVRGGWESTGF
VWEHDTARYARISEARAAEQESMRQYAALTSCRMEYLRSLLDDPAAAPCGRCDNCAGAWY
STEVSGDALAGARAHLGRAGVEIAPRRMWPTGLSAVGVPLSGKIPAGEQALPGRAIGRLS
DLGWGDKLRRLLASPDGPVPDDVFAGVVATLAEWAKGEDRWPERPAGVVVVGSHSTPRLV
ESLGERIAEVGRLPLLGTVTPSASADGASRTNSAQRVRALHAAFTVPPSLASRLPTLTGP
VLLVDDLVDSGWTMAIVARLLCQSGAAAVLPFALALSA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
ctgggtgtgcgtcaggaagcgtctgttgttctgaagaagctcgctggtccttccgccgag
ttgcgggaggaccagtgggtcgccatcgaggccctggtcggccggggccgccgggtgctc
tgcgtgcagcgcaccggctggggcaagtccgcggtctacttcgtggcgaccgcgctgctg
cgcgcccgcggcgccggcccgaccgtgatcgtgtcgccgctgctcgccctgatgcgcaac
caggtcgacgccgcggcgcgggccggcatcaccgctcgcacgatcaactccgccaatctg
gaggagtgggacgagatcaccgcggagatcacggccggcgccgtcgacgtgctgctcgtg
agtcccgagcggctcaacaaccccgacttccgcgacaacgtcctgcccaagctcgccgcc
accaccggcctgctggtcgtcgacgaggcgcactgcgtctccgactggggtcacgacttc
cgccccgactaccggcggctgcgcaccctgctgctcgacctggcccccggcacgcccgtg
ctcgcgaccaccgcgaccgccaacgcccgggtcacggaggacgtggccgagcaactcggc
gacgccctggtgctgcgcggctccctcgaccgcgagtccctgcggctgggctcgctcacg
ctgccctcggccgcgcaccggctcgcctggctcgccgaccacctgcgggacctgccgggc
tccgggatcatctacacgctgaccgtcgccggcgcgcatgaggcggccgcctacctgcgc
ggccagggctacgaggtggcggcctacacgggccagtccgaggacagcgaccgccgcgcc
gccgaggccgatctcctcgacaaccggatcaaggcgctcgtcgccacgtcggcgctcggc
atgggcttcgacaagcccgacctcggttttgtggtgcacctgggtgccccgtcctcccca
atcgcgtattaccagcaggtgggccgcgcgggccgggccgtgcgcaaggccgacgtgctc
ctgctgcccggcaccgaggacgccgccatctggcgatacttcgcgtcgctggccttcccg
ccggaggagcaggtgcgcgccgtcctcgacgtgctcgccgccgccgaccgcccgctgtcc
acggccgccctggagccccgggtcgagttgcgccgcaaccggctggagctgatgctgaag
gtcctcgacgtcgacggcgcggtccggcgggtgcgcggcggctgggagtcgaccggcttc
gtgtgggagcacgacacggcgcgctacgcgcggatctccgaggcccgggcggcggagcag
gagtcgatgcggcagtatgcggcgctgacctcgtgccggatggaatacctgcgctcgctg
ctcgacgacccggcggcggcaccgtgcgggcgctgcgacaactgcgccggggcctggtat
tcgaccgaggtgtcgggtgacgcgctcgccggcgcccgggcacacctgggccgggccggc
gtcgagatcgctccgcgtcgcatgtggccgacgggcctgtccgccgtcggtgtgccgttg
tcgggcaagatcccggccggcgagcaggccctgccgggccgcgcgatcggccggctcagc
gacctgggctggggcgacaagctccggcgcctgctggcctcccccgacggcccggtcccc
gacgacgtcttcgcgggcgtcgtcgccaccctggccgagtgggcgaagggcgaggaccgc
tggcccgagcgcccggccggtgtcgtggtggtcggctcgcacagcaccccacggctggtc
gagtcgctgggcgagcggatcgccgaggtcggccgcctaccgctcctcggcacggtcacc
ccgagcgcctcggcggacggggcgtcgcgcacgaacagcgcccagcgcgtccgcgccctg
cacgccgccttcaccgtccctccgtcgctcgcgtcccgcctgcccacgctgaccggcccg
gtcctgctggtcgacgacctggtcgacagcggctggaccatggcgatcgtcgcccgcctg
ctttgccagtccggcgccgcggccgtcctcccgttcgcgctggcgttgtccgcctga
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