Dactylosporangium roseum: Drose_35540
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Entry
Drose_35540 CDS
T08480
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
dros
Dactylosporangium roseum
Pathway
dros03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dros00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Drose_35540
09124 Replication and repair
03420 Nucleotide excision repair
Drose_35540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dros03021
]
Drose_35540
03400 DNA repair and recombination proteins [BR:
dros03400
]
Drose_35540
Enzymes [BR:
dros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Drose_35540
Transcription machinery [BR:
dros03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Drose_35540
DNA repair and recombination proteins [BR:
dros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Drose_35540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
UWZ36306
LinkDB
All DBs
Position
7613923..7615563
Genome browser
AA seq
546 aa
AA seq
DB search
MPEGPLIVQSDKTLLLEVDHPDALACRMAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEGVVDALLRFSRYPVPHALLVDIADTMDRYGRLQLLNDPVHGLVLHALDRVVLVEVA
KSKKLAGMLGAHIDADTIVVHASERGRLKQALLKLGWPAEDLAGYVDGEAHAIDLAEDGW
ALRSYQREAVDSFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVAGRQWKRE
LVARTSLTEDEIGEYSGERKEIRPVTIATYQVLTTRRGGVFPHLDLFGARDWGLIVYDEV
HLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECVEVRVTLTESERMAYAVAEPEERYRVAATARTKLPVVRALVERHKGEQILVIGGYID
QLHHLGEFLDAPIVQGSTTTKERERLFDEFRSGELKTLVISRVGNFSIDLPEAAVAIQVS
GSFGSRQEEAQRLGRVLRPKADKRQAHFYTVVARDTIDTEYAAHRQRFLAEQGYAYTITD
ADDVLA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaaggtccactgatcgtccagtccgacaagaccctgctgctcgaggtcgaccat
ccggacgcgctcgcgtgccgcatggcgatcgcccccttcgccgagttggagcgctcgccg
gagcacgtccacacctatcggctgaccccgctgggcctgtggaacgcacgcgcggccggc
catgacgcggagggcgtcgtggacgcgctgctgcgcttctcgcgctatccggtgccccac
gcgctgctggtcgacatcgccgacacgatggaccgctacgggcggctccagttgctcaac
gaccccgtccacggcctggtgctgcacgcactcgaccgggtcgtgctggtcgaggtggcg
aagagcaagaagctggccggcatgctcggcgcgcacatcgacgccgacacgatcgtggtc
cacgcctccgagcgcggccggctcaagcaagcgctgctcaagctcggttggccggccgag
gacctcgccggttacgtcgacggcgaggcgcacgccatcgacctggccgaggacggctgg
gctctgcggtcctatcagcgcgaggcggtcgactcgttctgggccggcggctccggcgtc
gtcgtgctgccctgcggcgcgggcaagacgctggtcggcgccgcggcgatggcggaggcg
aaggcgaccacgctgatcctggtcaccaacaccgtcgccggccggcagtggaagcgcgag
ctggtcgcgcgcaccagcctgaccgaggatgagatcggcgaatactccggcgagcgcaag
gagatccgcccggtcaccatcgcgacctatcaggtgctgacgacccgccgcggcggcgtg
ttcccgcacctcgacctgttcggcgcccgcgactggggcctgatcgtctacgacgaggtc
cacctgctgcccgcgccgatcttccggttcaccgccgatttgcaagcccggcgccggctc
ggcctgaccgcgaccctggtgcgggaggacggccgcgagggcgacgtgttctcgctcatc
ggcccgaagcgttacgacgcgccgtggaaggacatcgaggcgcagggctggatcgctccg
gccgagtgtgtcgaggtgcgcgtgacgctgaccgagagcgagcgcatggcgtatgcggtc
gcggagcccgaggagcgctaccgcgtggccgccaccgcccgcaccaagctgcccgtcgtg
cgggcgctggtcgagcggcacaagggcgagcagatcttggtcatcggcggctacatcgac
cagctccaccacctcggcgagttcctcgacgcgccgatcgtgcagggctcgacgaccacg
aaggagcgcgagcggctgttcgacgagttccgctccggcgagctgaagacgctggtcatc
tcgcgggtcggcaacttctcgatcgacctgcccgaggccgcggtggccatccaggtctcc
ggcagcttcggctcacggcaggaggaggcgcaacgcctcggccgcgtgctccgcccgaag
gccgacaagcggcaggcccacttctacacggtggtggcccgcgacacgatcgacacggaa
tacgcagcacaccgccagcggttcctggccgagcagggctacgcctacacgatcaccgac
gccgacgacgtcctcgcatag
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