Devosia rhodophyticola: PSQ90_00045
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Entry
PSQ90_00045 CDS
T09920
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
drp
Devosia rhodophyticola
Pathway
drp03030
DNA replication
drp03430
Mismatch repair
drp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSQ90_00045 (dnaE)
03430 Mismatch repair
PSQ90_00045 (dnaE)
03440 Homologous recombination
PSQ90_00045 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drp03032
]
PSQ90_00045 (dnaE)
03400 DNA repair and recombination proteins [BR:
drp03400
]
PSQ90_00045 (dnaE)
Enzymes [BR:
drp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSQ90_00045 (dnaE)
DNA replication proteins [BR:
drp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSQ90_00045 (dnaE)
DNA repair and recombination proteins [BR:
drp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSQ90_00045 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WDR05908
UniProt:
A0ABY7YXU3
LinkDB
All DBs
Position
complement(7134..10589)
Genome browser
AA seq
1151 aa
AA seq
DB search
MNGPGFIHLHVHSAYSLLEGALQLEKILGLAKEDEQPALGIADTGNLFGALEFSEKAVKK
GIQPLVGVEMSVDFAAAEERTSERGNHSFSTKSSLVLMAQTEVGFGNLSRLVSQAYLQGG
EGAARARLEWLTREGLEGILCLTGGPEGAIDPCFAAGHDAQAIKRLNLLREAFDDRLYIE
IQRHGRPIEAGVEPRLIDFAYRQGLPLVATNEPFFRSVAEFEAHDALLAIAGGTVLAQTE
RRKLNDQYYFKTRAEMVELFADLPEALDNTIEIAQRIGYRPHTRKPILPKFAAAPDLTDD
EAVAVEAEALRVMAVEGLDRRLASVGPGPGKTEQDYRDRLEFELGIIQSMKFPGYFLIVA
DFIRWSKSQGIPVGPGRGSGAGSLVAYATTITDLDPLRYNLLFERFLNPERVSMPDFDID
FCQDRREEVIRYVQQKYGSDQVSQIITFGTLQARAVLRDVGRVLQMPYGQVDRICKLVPA
NPADPWTLERTVKEVPQLKMMAEDDETVAELIAIARNLEGLFRHASTHAAGIIIGDRPLQ
DLAPLYRDPRSDMPVCQYNMKWSEAAGLVKFDFLGLKTLTTIEYAVQMINRDGGNFRIED
ISIEDEATYKLYAKGDTFGVFQVESPGMRRALVDLKPDRFEDIIALVALYRPGPMDNIPL
FCDRKHGREDVEYPHEALKAVLDETYGIIVYQEQVMQIAQLLSGYSLGEADMLRRAMGKK
IKAEMDAQRERFREGAIKYGLKQSLADTIFDLLAKFANYGFNKSHAATYALVSYQTGYLK
AHHPHEFFAASMTLDMGNTDKLADFRREATKSEIEIVPPCVNRSQAVFSVKDRRIHYGLC
AVKGVGRQVAEHIVEVRGDTPFKDLGDFATRVDPRLLSKRTLETLVNAGAFDEIVDRREE
AFVAIESVIGMAQALTAERTEGQGNMFDMGTPEPIKLPQGIPAWSTTERAEREFSAIGFH
LSAHPLDAYAELFDRFRVQRWMDFERAVKDGASAGRLAGTISGRQDRRTRKGTPMMILNL
SDQSGSFECIAFSEQINEFGSILQVGKSVILQVGADERPDGVSIRLLDAQAIEEAAEKVE
RRMTVFAADQKCLPPISAQLKRGGEGAVSFVVIRDGGAREYEIELPGNFRLNAEIAGGIK
ALEGVMDVRLN
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtcccggttttatccatctgcacgtgcattcagcatattccctgctcgaggga
gcgctgcagctcgaaaaaattctgggactggccaaggaggatgagcagcctgcgttaggc
attgctgacaccggcaacctgtttggcgcgctcgaattttccgaaaaggccgtaaagaaa
ggcattcagccgctagtcggcgttgaaatgtcagtcgatttcgcagccgccgaagaacgc
accagcgagcggggcaatcacagtttttccacaaaaagcagtctggtgctgatggcgcag
actgaagtggggtttggtaacctgtcgcggttggttagccaggcctatctacagggtggg
gagggcgcagcgcgagcccgacttgaatggctgacgcgcgaaggtcttgaaggcattctg
tgtctgacaggcgggccagagggcgcgattgacccctgttttgcagcgggacacgatgcc
caggcgatcaagcgtctgaacctgctgcgcgaggcctttgatgatcgactttatatcgaa
attcagcggcatggccgtccgattgaagcaggagtcgaacctcggttgatcgactttgcc
tatcggcaggggctgcctctggtcgcgaccaatgagccgttcttccgttcggttgccgaa
tttgaggcgcacgatgcactgttggcgattgccggaggcacggtactggcccagaccgag
cggcgcaagctcaacgatcaatattatttcaagacgcgcgctgaaatggtcgagcttttt
gccgacctgccagaagcgctcgacaatacaatcgaaatagcccagcgcattggctatcgg
ccgcacacgcgtaagccgatcctgcccaagtttgccgcggcaccggatctgaccgacgac
gaagccgtggcggttgaagcggaggcattgcgggtcatggccgtcgagggcctagatcga
cgccttgcctcagtcgggccagggccgggcaagaccgaacaggactaccgcgaccggttg
gaatttgagttgggcatcattcaatccatgaagttccccggctacttccttatcgtggcg
gattttatccgctggtcgaagtctcagggcattccagtggggccgggccgtggctcgggc
gcgggttcgcttgtggcctatgcaacaaccatcaccgatctcgacccgttgcgctataat
ttgctgttcgagcgcttcctcaatcctgaacgtgtatcgatgcccgactttgatatcgat
ttttgtcaggacaggcgcgaagaagtcattcgctatgtccagcaaaaatatggctcggat
caggtttcccagataatcacatttggaacgttgcaggcccgtgcggttttgcgcgatgtc
ggtcgcgtcttacaaatgccctatggacaggtggaccggatctgcaagctggtgccagca
aaccctgccgatccctggacgctggaacgtaccgtaaaggaagtgccgcagctcaagatg
atggctgaggacgatgaaacagtcgccgagctgattgccattgcccgcaatcttgaaggt
ctgtttcgccacgcctcgacccacgcggccggaattatcatcggtgaccggcctttgcag
gatctggcgcctctctatcgtgatccgcgttcggacatgcctgtttgccagtacaacatg
aaatggtcggaagcggcggggctggttaagttcgacttcttgggtctcaagacgctcacc
acgattgaatatgccgtccagatgatcaaccgcgatggcggcaatttccgcatcgaggac
atctcgattgaagatgaggcgacctacaaactttatgcaaagggcgacacctttggcgtc
ttccaggtggaaagtccgggaatgcggcgggcgctggttgatctgaagcctgaccgattt
gaagatattattgcgttggtggcgctctatcggcccggcccgatggataacattccactg
ttttgcgaccgaaagcatgggcgcgaggacgttgaatatccccacgaggcgcttaaggcg
gtgcttgatgaaacctatggcatcatcgtctatcaggagcaggtgatgcagatcgcccag
ttgctgtcgggctattcgctgggcgaagccgacatgctgcggcgcgccatgggcaagaag
atcaaggcggaaatggacgcgcaacgcgagcgtttccgcgaaggggcaatcaagtacggg
ctcaagcaaagtctggctgatacgatctttgatttgctggccaagtttgccaattacggc
ttcaataagagccatgcagcgacctacgccttggtcagttatcaaacaggttacctcaag
gcccaccacccccatgagttctttgccgcgtcaatgacgctcgatatgggcaacaccgac
aaactcgcagatttccggcgcgaagccaccaagagtgaaatcgagatcgtgccaccctgc
gtaaaccggtcgcaagccgtgttctcggtcaaggacaggcgcatccactacggactttgt
gctgtcaaaggggttggacggcaggtcgccgagcatatcgtcgaggtgcgcggcgatacg
cctttcaaggatttgggagattttgcaacgcgcgttgacccccggctgttgtcgaagcgc
acgttggaaactctggtcaatgcgggtgcatttgacgagatcgtcgatcggcgcgaggaa
gcgttcgtcgctatcgagtcggtaatcggcatggctcaggcgctaacagcagaacgcact
gaaggtcaggggaacatgttcgacatgggtacgcccgagccaattaaactgccgcaaggt
atccccgcatggagcacgacggagcgggcggaacgtgagttctcggcaatcggctttcat
ttgtctgctcatccgcttgatgcctacgccgaattgtttgatcgtttccgcgtgcagcgt
tggatggattttgagcgcgccgtcaaggatggagcgtcggctggacggctggcgggtacg
atttccggtcgtcaggatcgacgaacccgcaagggcacgccgatgatgattctcaatttg
tctgaccagagcggcagttttgagtgcatcgccttttccgagcagataaacgagttcggg
agcattttgcaggttgggaaatcggtgatcttgcaggtgggagccgacgaacgccccgat
ggcgttagcatcaggcttctggatgctcaagccatcgaagaggcggcagaaaaagtggag
cggcggatgacggtttttgctgctgaccagaaatgtctgcccccgatcagcgcccagctc
aaacggggcggggagggggcggttagcttcgttgtcattcgtgacggtggcgcacgcgag
tacgaaattgaactgccgggcaattttcggctcaatgccgagattgccggcggcatcaag
gcgctcgagggcgtgatggatgtgcggctgaattag
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