Devosia rhodophyticola: PSQ90_00325
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Entry
PSQ90_00325 CDS
T09920
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
drp
Devosia rhodophyticola
Pathway
drp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSQ90_00325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
drp03021
]
PSQ90_00325
03400 DNA repair and recombination proteins [BR:
drp03400
]
PSQ90_00325
Enzymes [BR:
drp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSQ90_00325
Transcription machinery [BR:
drp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSQ90_00325
DNA repair and recombination proteins [BR:
drp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSQ90_00325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Phage_tube_2
Motif
Other DBs
NCBI-ProteinID:
WDR05948
LinkDB
All DBs
Position
complement(62576..63595)
Genome browser
AA seq
339 aa
AA seq
DB search
MTIQRNWQELIKPTKLEIVSGSDNARVASVVAEPLERGYGLTLGNALRRVLLSSLQGAAV
TAIQIDGILHEFSSLPGVREDITDLVLNVKEIALRMGSEGPKRLALSKQGPGSVTAGDIK
VTGDIEVLNPELVICHLDDGAEINIEFTVNTGKGYVAADKNRPEDAPIGYIPVDALFSPV
RRVSYKVDATRAGESLDKDKLTLQVETNGAISPDDAVAFAARILQDQLSVFVNFEEPSKE
KTQDAVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMDVANWPPENIDDLAKRYEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatccagaggaactggcaagaacttattaagccgaccaagctggagattgtttcg
ggcagcgacaacgcgcgcgtggcctcggttgtagccgagccgcttgagcgcggttatggg
cttactcttggtaacgcccttcgtcgtgtgctgctgtcgtcgcttcagggcgcggcagta
acggcaatccagatcgacggcattcttcacgaattttcgtcgcttcccggcgtacgggaa
gacattaccgaccttgtgctcaacgtcaaggaaatcgcactgcgtatgggatcagaaggt
cccaagcgtttggctctttccaagcaggggcccggttcggttactgcaggcgacatcaag
gtcaccggcgacatcgaagtactcaatcctgaactcgtcatctgccacctcgatgatggc
gccgagatcaacattgagttcacggtcaataccggcaaaggttatgttgcagcggacaag
aaccgccccgaagacgcaccgattggttacattccggtcgatgcgctgttctcgccggtc
cgtcgcgtatcctataaggtcgacgcaacccgtgcgggcgaaagcctcgacaaggacaag
ttgacgcttcaggttgaaaccaatggcgcgatctcgccggacgacgctgtcgcctttgca
gcgcgcattctgcaggatcagctgtcggtctttgtgaatttcgaagagcccagcaaggaa
aagacccaggatgccgttccggaactggcattcaatcctgcgctgctcaaaaaggtcgac
gagctcgaactgtcggtccgttcggccaattgcctcaagaacgacaacattgtctatatt
ggtgatctgatccagaaaactgaagcggaaatgttgcggacccccaatttcggccgcaag
tcgctcaacgaaatcaaggaagtgctcgcgcaaatgggccttcatctcggaatggacgtt
gctaactggccacccgagaacatcgatgacctcgccaagcgctacgaagatcattattga
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