Devosia rhodophyticola: PSQ90_01125
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Entry
PSQ90_01125 CDS
T09920
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
drp
Devosia rhodophyticola
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
drp01002
]
PSQ90_01125
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
drp01011
]
PSQ90_01125
Peptidases and inhibitors [BR:
drp01002
]
Cysteine peptidases
Family C82
PSQ90_01125
Peptidoglycan biosynthesis and degradation proteins [BR:
drp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
PSQ90_01125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
NCBP3
Motif
Other DBs
NCBI-ProteinID:
WDR07451
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Position
complement(220125..221327)
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AA seq
400 aa
AA seq
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MPAVLRANATESLADIFSRDRVLRGGEDVEATAEAKALVDTPEPLMSFDTANNLQLAISQ
YEPFVAAGGWEEIPRDAYRLKLGTSRRAVVSLKRRLMESGDMPTSAKLDEMVDVDTDRAI
RAFQARHGLIVTGEVDEATFYAMSVPAADRLNQLYLNLQRVQRLAPNLSDRYVVVNIPAA
SIEAVELGTVAQRHTAVVGRVDRATPILDSKIYQINFNPYWHVPKSIIRADLTKYMQEDP
DYLTKFRIHIYDSKGIEVEPTQIDWTTDDAVNYMFRQEPGAENSMGHVKINFHNKYNVYL
HDTPSKSLFGENARFHSSGCVRVSAVNELVSWLLRDNGGWDINNVNGAFDSNERLDVEIK
QPVPIHTTYITAWANRYGSVSFRDDVYDYDAQGKVTFEDI
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgtgttgcgcgccaatgccaccgagtcgttggccgacattttctctcgtgat
cgcgttctgcgcgggggcgaggatgtggaggcgacagccgaagccaaggcgctcgtcgat
acgcccgaaccgctgatgtcctttgataccgccaataatctacagttggcgatttctcag
tacgagccttttgttgccgccggtggctgggaagaaattccacgtgacgcctatcgtctc
aagctcggtaccagccgccgcgccgttgtttcgctaaagcgccgtctgatggaatcaggc
gatatgcccaccagcgccaagcttgatgaaatggttgatgtcgataccgatcgcgccatt
cgtgcttttcaggcccgccacggtctgatcgtgaccggtgaagtggacgaagcaactttt
tatgccatgtcggtacctgctgcggaccgcctcaatcagctttacctcaatctacagcgc
gtccagcgcctcgcgccgaatctttcggatcgctatgtcgtggtcaatattcctgcggcg
tccattgaagctgtggaactgggcaccgttgcccagcgccacactgccgttgttggacgc
gttgatcgtgccacgccaattctcgacagcaagatttatcagattaatttcaatccctat
tggcatgtacccaagtcgatcattcgcgccgatttgaccaagtacatgcaggaagatcca
gattatctaacgaagttccgaatccacatctacgacagcaaaggtatcgaggttgagccg
actcagatcgattggacgaccgacgatgccgtgaactacatgttccgtcaggaacccggc
gccgaaaattcaatgggccacgtgaagattaacttccacaacaagtacaatgtgtatctg
cacgacaccccgtcgaagtcacttttcggcgaaaatgctcgttttcattcctctggttgc
gtccgcgttagcgcggtgaatgagcttgtatcgtggttgcttcgtgacaatggcggctgg
gatatcaataacgtcaatggtgcttttgattccaatgagcggctcgatgttgaaatcaag
cagccagttcccattcataccacctacatcacggcttgggctaaccgttatggctccgtc
tcattccgtgatgacgtttatgactacgatgcccaaggcaaggtgacgttcgaagacatc
tga
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