Devosia rhodophyticola: PSQ90_01230
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Entry
PSQ90_01230 CDS
T09920
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
drp
Devosia rhodophyticola
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
drp01011
]
PSQ90_01230
Enzymes [BR:
drp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSQ90_01230
Peptidoglycan biosynthesis and degradation proteins [BR:
drp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSQ90_01230
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_2
TPR_6
TPR_8
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
WDR06111
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Position
238879..240900
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AA seq
673 aa
AA seq
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MNNSVAVRLFALLLGATCLAPVAPTVANETIDQTTTGSINANVDVSTALSRGTVGFSKTL
DLLVVGDAVSAYASAKSLGNTERRAIQWAAIYFNSGKIDADSVSRFAKDAPDFASPGLYK
TRLEQSLSAESPTAETIIARLGGAVPNTIDGQISLASAYAAAGQKERAATLARNIWVENY
LTGEQETKVLDTLGTLLTREAHWARAVHLMMNDRASGSERLLPMLSTGQQSLVVARAAVS
RNESNAKALLDKVDPAFQNDPVYIFSRVQRARQAGLLDSAVDWLAKAKGDLPDADDWWYE
RRTLLRAALSAGKATTAYVAAAGYTKGPEGRLVDASFHAGWIALSFLNDANSAKAHFLKM
RSMSTLPDTITQANYWLGRAEARLGNVADAKAAYEKAAEYGMVYYGLLARAELGLHGVDL
RPLPAWQQSESLFNGREVVKAIRLFAANGRNDYAEPLLRHFGTGLTNAGELLLAARLAQE
IGAHQLAISIADAAERRGIPLDLFNYPKDGIPADTKIFADRAAVYAVARQESRFQIDAVS
RSGARGLMQLMPGTAKDTAKAAGVDYSPAKLTSDVRYNALLGSTYLGAQLSRYDGSLVLA
AAAYNAGPGNANKWIAAFGDPRLDNVDPVIWVELIPFQETRKYVQRVLGNYLVYRERLGH
NDLTITQALRKIE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacagcgttgccgttcgtttgttcgcattgctgctcggcgcgacgtgtctggcg
cccgttgctcccactgtggccaacgagactatcgaccaaaccacgaccggcagcatcaat
gccaatgtggatgtttcaaccgccctatcccgtggcaccgtcggcttcagcaaaacgctg
gacttgcttgttgttggggatgccgtaagcgcttatgccagtgccaagagcctgggcaat
acggaacgacgcgccattcaatgggcggcaatctatttcaacagtggcaaaatcgacgcg
gacagtgtttcccgctttgccaaggacgcgcccgacttcgcctcccctggtctttacaaa
acccggctggagcaatcgctgagcgcagaatccccgactgccgagacaattattgcgcgc
cttggcggggccgttcccaatacgattgatgggcaaatatcgctggcgtcagcctatgcg
gcggccggacaaaaggagcgcgcggccacgttggcgcgcaacatctgggttgaaaattac
ctgacgggcgagcaggaaaccaaggtattggacactttgggcacgctgctgacgcgcgag
gcccactgggcgcgcgcggtgcatttgatgatgaacgacagggccagcggcagcgagcgc
ttattgcctatgttgagcacgggacaacaatcgctggttgtggcacgcgccgcagtatcg
cggaacgaaagcaacgccaaggcccttctcgacaaggttgatcctgcctttcagaatgat
ccggtctatattttctcgcgagttcaacgggcgcgacaggcggggctgctcgacagtgcc
gtcgattggctggccaaggcaaaaggcgatctgccggacgcggacgactggtggtatgag
cgcagaacgctgctgcgcgcggcgctaagcgcgggcaaggcgacgactgcgtacgtcgcg
gcggcgggttataccaaggggccggaagggcggctggtcgatgccagctttcatgccggt
tggattgcactgtcatttctgaatgatgccaacagcgccaaagcccatttcctcaagatg
cggtcaatgtccaccctgcccgacaccattacgcaagccaactattggttggggcgagcc
gaggcacggttggggaatgtcgcggacgccaaggccgcgtacgaaaaggccgcagaatat
ggcatggtctattatggtctgttggcgcgggccgagttgggcctgcacggggtggacctg
cgccctctgcccgcctggcaacaaagtgaaagcctgttcaatggccgcgaggttgtaaag
gctattcggttgtttgctgccaatggccgcaacgactatgccgaacccttgcttcgacat
tttggaaccggcctgaccaatgctggcgagttgttgctggcagcgcggctggcgcaggaa
atcggcgcgcaccaattggcgatttctatcgctgacgcggctgaacggcgcggaataccg
ctggatctgttcaactatcccaaggatggtattccggcggacaccaagatttttgcggac
cgggctgccgtctatgcagttgcacggcaggaatcgcggtttcaaatcgatgccgtttcg
aggtctggtgcgcgcgggctgatgcaattgatgcccggcacggccaaggacacggccaaa
gcggcgggcgttgattattcgcctgcaaaattgactagcgatgttcgctataatgcgttg
ctgggttcaacctatctcggggcgcaactgtcgcgctatgatggatcgttggtgttggcg
gcggctgcctacaacgcggggcctggcaatgcgaacaagtggattgccgcttttggcgat
ccgcgactggacaatgttgatcccgtgatctgggtcgaactcattccatttcaggaaacg
cgcaaatatgtacaacgggttctgggcaactatctggtttaccgcgaacggcttgggcac
aatgatttgaccatcacccaggcactgcgcaaaatcgagtag
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