Devosia rhodophyticola: PSQ90_03045
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Entry
PSQ90_03045 CDS
T09920
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
drp
Devosia rhodophyticola
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
drp03016
]
PSQ90_03045 (truB)
Enzymes [BR:
drp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSQ90_03045 (truB)
Transfer RNA biogenesis [BR:
drp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSQ90_03045 (truB)
Prokaryotic type
PSQ90_03045 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WDR06461
LinkDB
All DBs
Position
627235..628137
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AA seq
300 aa
AA seq
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MNQVKRVKRNVSGWVVLNKPYDMTSTQAVGKIRWLFGAAKAGHAGTLDPLATGILPIALG
EATKAVPFVQDGTKVYRFTVKWGAATATDDAEGEIIATSDHRADAADIEAVLPDFVGTIS
QVPPTYSALKIDGERAYDLARAGEKVELAAREIHVESLTMLEHGNEQSVFEAICGKGTYV
RSLARDIAERVGTNGHVVALHRGAVGPFDDEDAITIDQLEALEILERDALLKPIAASLAD
LPEIRLTQQQLTGVKHGNPVLLTGAGAPIGLDEAWASFAGKVVATGYVERGQFVPRRVFN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaggtcaagcgtgtcaaacgcaacgtttccggctgggttgtcctcaacaagcca
tatgacatgacctcgacccaggccgttggcaagatccgttggctgtttggcgcggcaaag
gccgggcacgcgggcacgctcgatccgcttgctaccggcatcctgccgattgcacttgga
gaagcgaccaaggccgtgccgtttgttcaggatggcaccaaggtctatcggtttaccgtc
aaatggggcgcagccactgcaaccgatgatgcagaaggcgagatcattgcaaccagcgat
catcgcgccgacgccgccgacatcgaggctgttctgccggattttgtcggtacgatcagt
caggtgccgccgacttactccgcgctcaagattgatggagaacgggcctatgatctggcg
cgggccggcgaaaaggtcgagttagcagcgcgcgaaatccatgtcgaatccctcacaatg
ctcgagcatggcaatgaacaatcggtgtttgaagctatctgcggcaaaggcacttatgtc
cgttcgctggcgcgcgacatcgccgaacgggttggcacaaacggccatgtcgtggctctg
catcgaggggccgtcgggccatttgacgatgaagatgccataacaattgatcagctcgag
gcgttggagattttggaacgggatgcgctgctcaaaccaattgccgccagcctggcagac
ctgcctgaaatccgactgacccaacagcagcttactggtgtcaagcatggcaacccggtc
cttttgaccggcgcaggagcgcccatcggtctggatgaagcgtgggccagttttgctggt
aaagttgttgccacgggctatgtcgaacgcggtcagttcgtgccgcgccgcgtcttcaac
tag
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