Devosia rhodophyticola: PSQ90_03855
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Entry
PSQ90_03855 CDS
T09920
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
drp
Devosia rhodophyticola
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drp03009
]
PSQ90_03855
Enzymes [BR:
drp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PSQ90_03855
Ribosome biogenesis [BR:
drp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSQ90_03855
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
WDR06607
LinkDB
All DBs
Position
complement(794929..796602)
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AA seq
557 aa
AA seq
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MSETPATGDRLAKVIARSGLCSRRDAETWITAGRVEVNGKKVMTPAFNVTDRDKVMVDGA
PLAARQGTRVWLYHKPAGLVVTEKDPEGRSTIFEALASHGLPRVVTVGRLDINTEGLLLL
TNDGGLKRVLELPATGWLRRYRVRAHGAVTQAALDGLANGIEIEGIRYGAIEAKLEREQG
ANVWLTMALREGKNREVKNVLGALGLEVNRLIRVSYGPFQLGDIPIGGIETVKARMLREQ
LGKRLAEEADVDFDSEMPGKEELVGKPTRDRLTGRGTNTVEIAKQRFRFTDSAEKTEREI
REEKPRQDRPGRFGATRSAPPVKRFDDRDLGETGPPRKIIFDDGREEDFVEKTYGKKPGR
GDAGDKPSGKGGPRADGPRKSFDDKPRGPRRDDAGGDRPKRSFADKPKRDFGDRPQRRPD
GERPQRRPDAERPARAFAPRTRPDNERTQSPHPVTGRPGRNFSEKPRSFRPDGDRPARPA
NRRPEGERQRPGRDELGSVGKTYGKPRTRPDGKPQPKRDGAAPARGPRPGGRSGGRPAPG
GRPGGGRPSGGPRKPRG
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaactcccgccaccggtgaccgtctggccaaggtcattgcccgttcgggcctc
tgttcacgtcgcgatgccgaaacctggatcacggctgggcgcgtcgaggtcaatggcaaa
aaggtcatgacccccgcattcaacgttaccgatcgcgacaaggttatggtcgacggggcc
ccgctcgctgcccgtcagggcacgcgcgtctggctctatcacaagcctgcagggctggtt
gtcaccgaaaaagaccccgaaggccgctcgacgatttttgaggctttggccagccatggc
ctgccccgcgtcgtcacagttggccgtctcgatatcaataccgaaggccttttgctgctc
accaatgatggtgggctcaaacgcgtgctcgaattgcctgccaccggttggcttcgccgt
taccgcgttcgcgcccatggcgccgtcactcaggcagcgctcgatggtctggccaatggc
attgagatcgaaggtatccgctatggggccatcgaagccaaactcgaacgcgagcagggg
gccaatgtctggctgaccatggcgctgcgtgaaggcaagaaccgcgaagtcaagaatgtc
cttggtgcattgggtcttgaggtcaatcggctgatccgcgtcagctatggtccgttccaa
ctgggcgatattcccatcggcgggattgaaaccgttaaggcccgcatgctacgcgaacag
cttggcaaacgcctcgctgaagaagccgatgtggatttcgacagcgaaatgcccggcaag
gaagaattggttggtaaacccacccgcgaccgtctgacagggcgcggcaccaatacagtc
gaaatcgcaaaacagcgttttcgctttaccgatagtgcggaaaagaccgagcgcgaaatt
cgtgaggaaaagccgcgccaggatcgtccgggccgctttggcgccacccgctccgcccca
ccggtcaagcggttcgatgatcgcgatctgggcgaaaccggacccccacgcaaaatcatc
tttgatgatggccgcgaagaagattttgtcgaaaaaacctatggcaagaagcctggccga
ggcgatgctggcgacaaaccatccggcaagggcggtccgcgcgccgatggtccgcgcaaa
tcgtttgacgacaagccgcgcggcccccgccgcgacgatgccggcggcgatcgccccaaa
cgctcatttgccgacaagccaaagcgcgattttggtgaccgtccgcagcgacgccctgat
ggcgaacgcccccagcgtcgccccgatgccgagcgcccagcccgcgccttcgcgccccgc
actcgccccgacaatgaacgcacccagtcaccccatccggtgaccggtcgtccgggccgt
aatttttctgaaaaaccccgcagcttccgtcccgatggcgaccgcccggcgcgcccggca
aaccgtcggccagaaggggaacgccagcgtcccggccgcgacgaattgggctcggtcggc
aagacttatggcaagcccagaacccgccctgacggcaagcctcagcccaagcgcgatggt
gccgcccctgcgcgtggcccacgtcccggtgggcgctctggcggccgcccggcacccggt
ggtcggcccggtggcggtcgtccctctggtggtccgcgcaagccgcgcggctag
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