Devosia rhodophyticola: PSQ90_04940
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Entry
PSQ90_04940 CDS
T09920
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
drp
Devosia rhodophyticola
Pathway
drp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSQ90_04940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
drp02000
]
PSQ90_04940
Transporters [BR:
drp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PSQ90_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_24
AAA_22
AAA_18
nSTAND3
NB-ARC
Zeta_toxin
AAA_16
DO-GTPase2
ATP-synt_ab
AAA
GvpD_P-loop
AAA_33
DUF3584
Motif
Other DBs
NCBI-ProteinID:
WDR06800
LinkDB
All DBs
Position
complement(1005468..1007330)
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AA seq
620 aa
AA seq
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MNSDTVGRARARVKAPGHLVSAQWGQGLGTLVRITRMALRHPWQVAIAITATMIASGLQL
AIPRLLGQAVDHAQGIIGGGQEAQSALWISAITLLVVSVLRGLFTLTQNYFSESVGHTIG
YELRLAYYEKIQRLSFAFHDKVHSGDLITVGMLDLDGVRMFFATGLVRTVLLSVLIGVGA
YLLISTDAVLGLLALSFVPFVAWRSSVAQLKLRGTWLILQEKLSGLSRVMEENLGGIRVV
RAFAGQKHEMDKFDAASKEALNLTHQRVNIRVRNTSAMTFSFFFSMGLVLWFGGNMVIDG
TMTVGTLTTFLTFMTILQMPVRQLGMMVNSYARASTCGSRLFNLLDMDLGIDDAPGATDL
KVTEGTLKFDNVDFTFPGSGGQKALSDVSFEAHAGQTIGIVGAPGSGKTTLAHLIPRFYD
IDSGSITLDGQDISKVTLRSLRQSVAVVQQDSFLFTTTIENNIAYGDPWAKEPKIERAAE
SAQLHNYVMGLPGGYDTVVGERGVSLSGGQRQRLSIARTLVLKPAVMVFDDSTAAIDAGT
EHRIRSAIKRFAKDRITIVIAHRLSSLMHADFILFMEEGKIVERGSHEELLALNGRYRAL
FDLQVRPGEDIAPTPAEASS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
ttgaattccgatacggttggacgtgcccgcgcgcgcgtcaaggcccccggccatctggtc
tctgcccaatgggggcagggtcttggcacattggtgcgcattacccgcatggcattgcgc
cacccctggcaggtggcaatcgccataacagcgacaatgatcgcttcgggcctgcagctg
gccatccctcgcttgcttggtcaggcggtggaccacgcgcagggcattattggcggcgga
caggaggcgcagagcgccctttggatcagtgccatcaccctgcttgtggtgtcagttttg
cgcggtctttttacccttacccaaaactatttcagtgaatcggtggggcacaccatcggt
tatgaattgcgcctggcgtattacgaaaaaatccagcgtctaagctttgcctttcatgac
aaggtgcactccggtgatctgattaccgtcggcatgctcgatcttgacggggtgcgcatg
ttctttgccaccgggctggttcgcaccgtcctgttgagtgtcttgatcggggttggcgca
tatctgctgatttcgaccgatgcggtgctcggcctgctcgccctgagctttgttcccttt
gtcgcttggcgttcgtctgtagcccaattgaagctacgcggcacctggctgatcctgcag
gaaaaactgtcggggttgagccgggtgatggaagaaaatctcggtggtattcgcgttgtg
cgcgcatttgccggtcagaagcacgagatggacaagtttgacgccgcctcaaaggaggcg
ttgaacctgacccaccaacgcgtcaacatccgcgtgcgcaacaccagcgccatgacattt
tccttcttcttttcgatgggtctggtactctggtttggtggcaatatggtcatcgacggg
accatgaccgtgggtacactcaccacatttctgaccttcatgacaattttgcagatgccg
gtgcgtcaactcggaatgatggtcaattcctacgcccgcgcgtcgacctgcggctcgcga
ctgttcaatctgctcgatatggatctggggatcgacgacgcgcccggggctaccgacctc
aaggtgaccgaggggacgctcaagttcgacaatgttgattttacctttcccggatctggt
ggacaaaaggcgctctcggacgtgagttttgaagcccatgccggccagaccatcggcatt
gtcggcgcccccggcagcggcaagaccacgctggcccacctcatcccacgcttttacgac
attgatagcggttccattacccttgatggccaggatatttccaaggtcacattgcgttcg
ctgcgccagtcggtcgctgttgtccagcaggattcattcctgttcacgacgacaatcgaa
aacaacatcgcttacggcgatccctgggcaaaggaacccaagattgagcgggcggccgaa
agtgcccaattgcacaattatgtaatgggcctgcccggcggctacgataccgtggtcggc
gagcgcggggtgtcattgtcaggcggccagcgccaacgcctttcgattgcccgtactttg
gtgctcaagcccgccgtcatggtgtttgacgattcaaccgcagccatcgatgcaggcacc
gaacatcgcattcgcagcgccatcaaacgatttgccaaggatcgcatcaccatcgtgatc
gcgcatcgcctcagttcgcttatgcacgccgatttcatcctgttcatggaagaaggcaag
attgtcgagcgcggcagccatgaagagctgctggccctcaacggtcgctatcgtgctcta
tttgatctgcaggtccgccccggcgaagacattgcgccaacaccagcggaggccagctcg
tga
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