KEGG   Devosia rhodophyticola: PSQ90_05390
Entry
PSQ90_05390       CDS       T09920                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
drp  Devosia rhodophyticola
Pathway
drp03030  DNA replication
drp03410  Base excision repair
drp03420  Nucleotide excision repair
drp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:drp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSQ90_05390 (polA)
   03410 Base excision repair
    PSQ90_05390 (polA)
   03420 Nucleotide excision repair
    PSQ90_05390 (polA)
   03440 Homologous recombination
    PSQ90_05390 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:drp03032]
    PSQ90_05390 (polA)
   03400 DNA repair and recombination proteins [BR:drp03400]
    PSQ90_05390 (polA)
Enzymes [BR:drp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSQ90_05390 (polA)
DNA replication proteins [BR:drp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PSQ90_05390 (polA)
DNA repair and recombination proteins [BR:drp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PSQ90_05390 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PSQ90_05390 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 WHD_BrxR
Other DBs
NCBI-ProteinID: WDR06884
UniProt: A0ABY7YZV8
LinkDB
Position
1100068..1102959
AA seq 963 aa
MHLLLVDGSTYIFRAYHALPPLTRKSDGLPVGCVSGFCNMLFKLTEDMKGDDAPTHMAVI
FDHKGKTFRDDLFPAYKAQRPPAPEDLVPQFPLTRAATKAFSIACIEQEGWEADDIIATY
ACQMRAAGGKVTIVSTDKDLMQLVEPDGSIKMLDTLKNRWIGVDEVIEKFGVGPDKVIEV
QSLAGDSVDNVPGVPGIGYKTAAELITTYGDLENLLAHAHEIKQNKRREKLIENAENARI
SKRLVTLEQQVPVELTLDALLREPISGAKLVPFLKAMEFNTILKRIAGLEDFDPEAFEAD
SELRAGGLEGIKSTSLSVAKAKLSAPATAGEGATLHAQRMHEKIKAIPVDYDAYETITTM
DQLNRWIGMIVAKGHVAIDTETSGLDNQAADLVGVSLSTEPGNGAYIPLGHSNGAASLLD
EGGLMEGQLPIRDVVDALKSVLENPGILKIGQNLKFDMGVLFRYGITLAPIDDTMLLSYA
LDGAQYNGMGVLADAWLGHKCIPFTELAGTGKAQKTFDQLEIAPAARYAAEDADITLRLW
HVLKPRLVAENATTLYETLERPLAPVLARMEARGISVDRSILSRLSGDFAQRAAAFEAEA
HEAAGQNFNLGSPKQLGEILFDKMGLEGGTKTKTGAWATGAGLLEELALKGVPLARTIVD
WRQLTKLKGTYTDALPTYINARTKRVHTSYSQASVLTGRLSSNDPNLQNIPVRTADGRKI
RTAFVAAPDKVLVSADYSQIELRVLAHIADITALKDAFEEGLDIHAMTASEMFNVPVEGM
PSDIRRRAKAINFGIIYGISAFGLANQLGIGRAEAGDYIKTYFERFPGIKDYMEEQRRRV
KTDGFVTTLFGRKIQFPNANSKNPAERSFVERASINAPIQGSAADIIRRAMIRMEPALKA
QNIEADMLLQVHDELIFEIPTGTEELAIPAIKHIMESAAEPAVRLSVPIAVDAHAAGNWD
EAH
NT seq 2892 nt   +upstreamnt  +downstreamnt
atgcatttgctgctcgtcgatggttcgacctatattttccgcgcctaccacgccttgccg
ccactgacgcgcaagtcggacgggctgcctgtggggtgcgtttcgggcttttgcaacatg
ctgttcaagctgaccgaggatatgaagggcgatgacgcgcccacccatatggcggtgatc
tttgatcataagggcaagacgtttcgcgacgatctctttccggcctataaagcacaacgt
ccgccggcgcccgaagatctggtgccccagttccctctgacccgggccgcgaccaaggcg
ttttcgattgcctgcatcgagcaggaaggctgggaggcggatgacatcatcgccacctat
gcctgccagatgagagcggcgggcggcaaggtcaccatcgtctcgaccgacaaggatctg
atgcagctggtcgaacccgatggctcgatcaagatgctcgatactctcaagaaccgttgg
atcggggttgatgaggtcattgaaaaatttggcgtcggccctgacaaggtgatcgaggtg
caatcgctggctggcgacagtgtcgacaatgtccccggcgtgcccggcattggctacaag
accgccgccgaactgatcaccacctatggcgatctcgaaaatcttttggcccatgcccac
gagatcaagcagaacaagcggcgcgaaaagctgattgagaacgccgaaaatgcccgcatt
tccaaacgcctggtgacgctcgagcaacaagtgccggtcgaattgacccttgatgccttg
ctgcgcgagccgatcagcggcgccaagctggtgccgttcctcaaggcgatggaattcaac
accatcctcaaacgtattgccgggctcgaggattttgatcccgaagcctttgaggccgat
tctgaattgcgcgccggtgggcttgaggggatcaaatccacctcgctgtcggtcgccaag
gcaaagctgtcggcccccgccaccgctggagaaggggcaacgctgcatgcccagcgcatg
cacgaaaagatcaaggccattccggttgattacgacgcctatgaaaccatcaccacgatg
gatcagctcaatcgctggatcggcatgatcgtggccaagggccatgtcgccatcgacacc
gaaacctcgggactcgacaatcaggccgccgatctggttggcgtgtcgctgtccaccgag
ccgggcaatggcgcctatattccgctgggccattccaatggcgcggccagccttctggat
gagggcgggctgatggaggggcaattgccgatccgcgatgtcgtggatgccctcaagtca
gtgctcgaaaatccgggcattctcaagattggccaaaatctcaaattcgatatgggcgtg
ttgttccgctatggcattacgctggcgcccattgatgacacaatgctgctctcctacgcg
cttgacggagcgcaatataacggcatgggcgtgctggccgatgcctggcttggccacaaa
tgcatcccctttaccgagttggcagggacgggcaaggcgcagaaaacctttgatcagctc
gaaatcgcccccgccgcccgctatgccgcagaagatgccgatatcaccctgcgcctctgg
catgtactcaagccacggctggtggctgagaacgccacaacactttatgaaactctggag
cgcccgctggccccggttctggcccgcatggaagcgcgcggtatttcggtagatcgttcg
atcctgtcgcggctttcgggtgactttgcccagcgcgccgccgcctttgaggccgaagcc
catgaggcggccggccaaaatttcaatcttggctcgcccaagcaattgggggaaatcctg
tttgataaaatgggtctggagggcggtaccaaaaccaagactggtgcctgggccaccggc
gcggggcttctcgaagagctggcgctcaagggcgtgccgctggcgcgcaccattgttgac
tggcgccaactgaccaaactcaagggcacctataccgatgccctgcccacctatatcaat
gcccgcaccaagcgcgttcacacctcctattcgcaggcctcggtcctgaccgggcggctc
tcgtccaatgacccgaacctgcaaaacattccggtgcgcaccgccgacgggcgcaagatc
cgcaccgcctttgttgccgcccccgacaaggttttggtgtcagccgattattcccagatc
gaattgcgggttctggcccatatcgccgacatcaccgcccttaaggatgcgttcgaggag
gggttggatattcacgccatgaccgcctcggaaatgttcaatgtcccggttgagggcatg
ccctccgatattcgccgtcgcgccaaggcgatcaactttggcatcatttacggcatttcc
gcttttggcctcgccaatcaattgggcatcggccgcgccgaggccggggactatatcaaa
acctattttgagcgttttcccggcatcaaggactatatggaagagcagcgccgccgcgtc
aaaaccgatggctttgtcacaaccctgtttggtcgcaaaatccagttccccaacgccaat
tccaaaaaccccgccgagcgcagctttgtcgaacgcgcctcaatcaacgcccccattcag
ggttctgctgccgatatcatccgccgcgccatgatccgcatggaaccggcgctcaaagcg
caaaacatcgaagccgatatgctgttgcaggtccatgacgaactgatcttcgaaatcccc
accggcaccgaagaattggcgatccccgccatcaaacacatcatggaatccgccgccgaa
cccgccgtccgcctctccgtccccatcgccgtggatgcgcatgctgccgggaattgggat
gaggcgcattga

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