Devosia rhodophyticola: PSQ90_05640
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Entry
PSQ90_05640 CDS
T09920
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
drp
Devosia rhodophyticola
Pathway
drp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSQ90_05640 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drp03400
]
PSQ90_05640 (recF)
DNA repair and recombination proteins [BR:
drp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSQ90_05640 (recF)
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GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_23
AAA_29
AAA_27
ABC_tran
AAA_22
NACHT
AAA_16
AAA_30
PEP-utilisers_N
AAA_28
cobW
SbcC_Walker_B
IstB_IS21
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WDR07481
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Position
1158363..1159493
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AA seq
376 aa
AA seq
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MNTSANRSVSRLRLSAFRNYTAAALDLDARHVVLTGPNGAGKTNLLEAISLLSPGRGLRR
ASFDMVQAQGAEASWAVAATIETYSGPVDIGTGGNAGDGARRVRINGANARSVEAMSDYL
RVLWLTPAMDGLFSGPAGDRRRFLDRLVTTLIPGHSATVNDFDKIMRQRNRLLEDNGDAH
WLAAIETQMAETAAAIHLARTDSLTHLQALIAQSLSDGSFPAAQLALTPLFEDRHEPVSS
ADLETALIDIWRQTRALDRAAGRTTVGPHRVDLEVVHAQKAMPAMLGSTGEQKALLIGLV
LAHARLVKQRTGITPFLLLDEIAAHLDPDRRRALFDALDGLGGQCFLTGTDPMLFEALAD
RSQAILVRGGRLHPSD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
ctgaacacttccgccaatcgttcagtctcgcggctgcgcctgagcgcctttcgcaattat
acagcggccgcgttggatctggacgcacgccatgtggtgctgaccggcccgaacggggcg
ggcaagaccaatctcttggaagccatttcattgctgtcgccgggacgcggcctgcggcgt
gccagttttgacatggtccaggcacagggcgctgaggcatcatgggcagtcgctgcaacg
attgagacctacagcggcccggtcgacatcggcacgggcggaaacgcaggtgatggcgca
cgacgggtgcgtatcaatggcgccaatgcccgttcagttgaagcgatgagcgattatttg
cgcgttctgtggctgacgcctgccatggacggactgttttccggcccggcaggggatcgg
cgccggtttctggaccggctggtcacaacgctcattccgggtcattcggccacggtcaat
gattttgacaagatcatgcggcagcgcaatcgcctgcttgaggacaatggtgacgcccac
tggctggcagctattgaaacgcaaatggcagaaactgccgccgctatccatctagcgcgc
accgacagcctgacccatttgcaggccctgatcgcccaaagtcttagcgatggcagtttt
ccagctgcccagttggcgctaacaccattgtttgaggatcggcacgagcctgtttcgtcg
gcggatctggagacggcgctgatcgacatctggcggcaaaccagagcactggatcgtgcg
gcggggcgcaccaccgtggggccgcacagggtcgatctcgaggtggtccatgcccaaaag
gccatgcctgcaatgctgggctcaacgggtgaacagaaggcgttactgatcggcttggtg
ctggcccatgcccggttggtcaaacagcgtaccggcattacgccgtttctgctgttggac
gagattgcagcacatcttgatcccgaccggcggcgggcgctttttgatgcgttggatggc
cttggcgggcagtgtttcctgaccggtacagacccaatgctttttgaagcccttgcagat
cgcagtcaggcgatcctcgtacgtggtggacggcttcacccaagcgactaa
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