KEGG   Devosia rhodophyticola: PSQ90_06045
Entry
PSQ90_06045       CDS       T09920                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
drp  Devosia rhodophyticola
Pathway
drp02020  Two-component system
Brite
KEGG Orthology (KO) [BR:drp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSQ90_06045
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:drp02022]
    PSQ90_06045
Two-component system [BR:drp02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   PSQ90_06045
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA FleQ AAA_2 TadZ_N HTH_50 AAA_16 AAA_22 AAA_3
Other DBs
NCBI-ProteinID: WDR06997
LinkDB
Position
complement(1251854..1253197)
AA seq 447 aa
MNAPIEVLFVDDEEDLRRAASQTLDLAGLPVRTASSAEDALAYVSRTWRGVLVTDIRMPG
MDGMQLLHRAISIDEDLPVVLVTGHGDVNLAVDAMRAGAYDFIEKPFSVERLLESVTRAL
EKRQLTLENRELRSSVANRSDDLETRIAGRSKLMMAVRKQIRAIAPTHADVLIVGETGTG
KELAARAIHDLTLPGDRPFVAINCAAIPAEMMEAELFGYEAGAFAGAMRARFGKFEHARN
GTIFLDDIENMPLYLQAKLLRVVQERAVTRLGSNDPVPLNARFIATSSVDLERAADAELF
RKDLLYRLNIATLRLPPLADRAEDIPSLFVHLVHIVATQLRVPAPSPSDQMLSIISSRPW
PGNVRELRNAAERFVLGIDGLDERVGDRPSTTLRDRVNDFERQTIAAELQLRQGNLKSVY
ETLGLSRKSLYEKMQKLGLDRNDFRQS
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgaatgcgcccattgaagtgctgtttgttgacgacgaggaagatctgcgccgcgccgcc
agccagacgctggatcttgccgggcttccggtccgcactgccagttcggccgaagatgca
ctggcctatgtttcgcgcacatggcgtggcgtattggtcactgacattcgcatgccgggc
atggatggcatgcagctgctccatcgtgcaatttccattgacgaagacttgcccgtggtc
cttgtgactggtcatggcgacgttaatctggcggtcgatgccatgcgggccggggcctat
gatttcatcgaaaagccgttctcggtcgaacgcctgctggaatcggtcacccgcgctctc
gaaaagcgacagctcacgctggaaaaccgcgaactgcgttccagtgttgccaatcggtct
gacgatctggaaactcggattgccggtcgctcaaaactgatgatggccgtgcgtaagcag
atccgtgccattgcgcctacccatgcggatgtgctgatcgtcggtgaaaccggcaccggc
aaagaactggcggcgcgtgccatccacgatctgacattgccgggtgaccgaccatttgtt
gccataaattgcgctgccataccggccgaaatgatggaagccgaactattcggttatgag
gcaggggcttttgccggggcgatgcgcgcccgttttggcaaatttgagcacgcccgcaat
ggcacgatttttctggatgacatcgaaaacatgccgctctatttgcaggcgaaattattg
cgcgtcgttcaggagcgcgccgtaacgcgcttgggctcaaacgatcccgtcccgctcaac
gcccggtttatcgccacctccagcgttgatctggagcgggccgccgatgccgaactgttc
cgcaaggacctgctctaccggctcaatatcgccaccctccgtctgccgcctctggctgat
cgagctgaagacattccatcccttttcgtacatctggtccatatcgttgcaacgcagttg
cgggtgcccgcgccctcaccgtcggaccagatgctttcgataatcagcagtcgcccctgg
cccggcaatgtgcgcgaactgcgcaatgccgcagaacgctttgttttgggcattgacggt
ttggatgagcgggtcggcgacaggccaagcaccacactccgcgaccgggtcaatgatttc
gagcgccaaaccatcgcagctgaattgcagttgcggcagggcaatttgaaatcggtttac
gagacgttgggtctgtcgcgaaaatcgctctatgaaaaaatgcaaaaactcgggctcgat
cgcaacgacttccggcagagctga

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