Devosia rhodophyticola: PSQ90_08965
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Entry
PSQ90_08965 CDS
T09920
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
drp
Devosia rhodophyticola
Pathway
drp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSQ90_08965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drp03400
]
PSQ90_08965
Enzymes [BR:
drp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSQ90_08965
DNA repair and recombination proteins [BR:
drp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSQ90_08965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Zn_ribbon_PriA
ResIII
Helicase_C
AAA_34
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
WDR04476
UniProt:
A0ABY7YSX3
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All DBs
Position
1819335..1821503
Genome browser
AA seq
722 aa
AA seq
DB search
MDQTPDIVAVMVGVAVEGPYSYRVPEGMRVERGSIVLVPLGPRPTLGVVWGAPKDQFAHN
RLKDISRVFDVPALSEELLSLVDWVSRYTLAAPGMVLRAVLRSHEALEPVRPLTVFRATA
YEPEKLTAARLRVLDTLNDGQAWAKAALVGAAGVSASVIEGLEKAGALERLEVPPPPVVM
PPDPDTDVATLNAEQQQALDDIRALDPHAFGVALLDGVTGGGKTEVFFEAVADTLRAGRQ
ALILLPEIALTHTFLARFTKRFGTKPAEWHSDMTPVQRGRVWRGVLEGNVRAVVGARSAL
FLPFRELGMLVLDEEHDGAYKQSDGITYHARDMAVVRANLAKARVILASATPSVETRNNA
NAARYSHIMLNARFAEAAMPDIAAIDMREEGPAKGEWIAPRLAREIFGTLDRGEQALLFL
NRRGYAPLTLCRQCGHQYQCPDCSAWLVEHRFRGVLACHHCGHEQKIPKDCGACGAVDAL
VAVGPGIERIAEEAAARFPDARRVILSSDMGSNAHLRDRFSEVEKGDYDLIIGTQLVAKG
HHFEKLTLVGVLDADLGLAHGDPRAAEKTFQILTQVAGRAGRASRAGRALLQTYHPDHPV
MRAMVTGDREAFYAHELAAREAGGMPPFGRLAALIVSASEHDVAMGHAKKLLAAAPMADG
VRLFGPADAPVAMVRGRHRVRLLAQSGKGFDLSGYVRFWLASTERVSGNLRVQVDIDPQS
FM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatcagacaccagacattgttgcagtgatggtcggggttgccgttgagggaccctat
agctatcgcgtgccggagggcatgcgggttgagcgtggctcgattgttttggtaccgcta
gggccgcgtccaacactcggcgttgtctggggcgcgccgaaggaccaattcgcccataat
cggctcaaggacatctcgcgggtgtttgatgtgccagcgctcagcgaggaattgctgtcg
ctggtggactgggtgtcgcgttacacgctggctgcgccgggcatggtgttacgcgcagtt
ttgcgctcgcatgaggcgctggagccggtgcgcccgctgaccgtttttcgcgccaccgcg
tatgagcctgaaaagctcacagccgcgcggttgcgggtgctcgatacactcaatgatggg
caggcctgggccaaggccgcgctggtcggtgcggccggggtttcagcatctgtgattgag
gggctggaaaaggcaggggcgctggagcggctcgaagtgccgccgccaccggttgtgatg
ccacctgatcccgataccgacgttgccacgctcaatgccgagcaacagcaggcgcttgat
gatattcgtgcgcttgatccgcatgcgtttggcgtggcgttgctcgacggggtaactggt
ggtggcaagaccgaagtgttttttgaagcggtggccgatacgctgcgagcgggccgtcag
gcattgattctgttgcccgagattgcgctgacccacacgtttcttgcccgctttaccaaa
cggttcggcacaaaaccggcggagtggcattcagacatgaccccggttcagcgcggtcgc
gtctggcgcggcgtacttgaaggcaatgtgcgtgccgtcgttggtgcccggtcggcttta
ttcctgccgtttcgcgaattgggcatgctcgtgctcgatgaagagcatgatggcgcctac
aaacaatcggacggcatcacctatcacgcccgcgacatggcggtggtgcgcgccaatctg
gccaaggcgcgggtcattctggcgtcggcaacgccatcggtggaaacgcgcaataatgcc
aatgcggcgcgctatagtcacatcatgctcaatgccagatttgccgaggcggccatgcct
gacattgctgctatcgacatgcgtgaggaagggccggcaaagggcgaatggatcgcgccg
cgcttggcgcgggaaatttttggcacgctggatcgtggtgagcaggcgctgctgtttctt
aaccgacgcggctacgccccgctgacattgtgtcggcagtgcgggcatcaatatcaatgt
cccgactgttcggcctggctggtcgagcatcggtttcggggtgtgttggcctgtcaccat
tgtgggcatgaacagaaaatacccaaggattgcggggcgtgtggggcagtcgatgcgttg
gttgcagtcgggcccgggatcgaacgcatcgccgaagaggcggcagcgcgctttcccgac
gcccgtcgggttattctgtcgtcggacatgggcagcaatgcccatttgcgcgaccgcttt
tcggaggtggaaaaaggcgattatgatttgatcattggcacgcaactggtcgccaagggc
catcattttgaaaagctgacgctggtgggggtccttgatgcagatctggggcttgcccac
ggtgatccacgggcggcggaaaaaaccttccagatattgacgcaggtcgcggggcgcgcc
gggcgggcatcgcgggctggtcgagcgctgctgcagacttatcatcctgatcatccggtg
atgcgggccatggtgacgggggaccgggaagccttttatgcccatgaactagcggcgcgc
gaagcgggcgggatgccccctttcggacggctggccgcactgatcgtttcggccagcgag
catgacgtggctatggggcacgccaaaaaactgctggcggcggctccgatggccgacggt
gtgcgattattcggcccggcagatgcgcctgtggccatggtgcgcggtcggcaccgcgtg
cggttgctggcccagagcggcaaggggtttgacctgtcgggctatgtgcggttctggctg
gcctcgacagagcgggttagtggcaatttgcgggtgcaggtggacatcgatccgcaaagc
ttcatgtga
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