Devosia rhodophyticola: PSQ90_13825
Help
Entry
PSQ90_13825 CDS
T09920
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
drp
Devosia rhodophyticola
Pathway
drp03420
Nucleotide excision repair
drp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSQ90_13825
03430 Mismatch repair
PSQ90_13825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drp03400
]
PSQ90_13825
Enzymes [BR:
drp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSQ90_13825
DNA repair and recombination proteins [BR:
drp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSQ90_13825
MMR (mismatch excision repair)
Other MMR factors
PSQ90_13825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DUF3553
DMP19
Motif
Other DBs
NCBI-ProteinID:
WDR07560
UniProt:
A0ABY7Z3J4
LinkDB
All DBs
Position
complement(2822921..2825239)
Genome browser
AA seq
772 aa
AA seq
DB search
MQRPAAGPITSQFGRRDADYLAGLNEEQRDAVLSLEGPLLVLAGAGTGKTRVLTTRIAHI
LTTRKARGSEILSVTFTNKAAREMKERIAKLVGASVEGMPWLGTFHSIGARILRRHAELV
DLKSDFTILDTDDQIRLIKQLLQVENIDEKRWPARQFAGMMDNWKNRGLLPKDVSPADSG
FFANGKGQKLYADYQARLKTLNAADFGDLLLECIRLFRENPEVLAEYHRRFRYMLVDEYQ
DSNVAQYLWLRLLAQGKPAAEANICVVGDDDQSIYGWRGAEVDNILRFEKDFPGARVIKL
ERNYRSTANILKAASHLIAFNEGRLGKTLQTDVAEAGDPIAVTSVWDSEEEARSIGEELE
QIQRRGENLNDAAILVRASFQMREFEERFITLGLNYRVIGGPRFYERKEIRDALAYLRLV
AQPADDLAFERIINTPKRGLGDSTVKILFDAARHQRQPLLATVRMLLETEELKPKQRTTL
RNLVAQFDDWAERLRTIPHFELAEQILDESGYTAMWQNDKSPDSPGRLENLKELVRSMEE
FETLGGFLEHIALVMDRATGDDGDAVSIMTLHSAKGLEFNNVFLPGWEEGLFPHQRSLDE
SGRAGLEEERRLAYVGITRARKRALISVAQNRRIHGLWQSAIPSRFLDELPADAVEVKDT
GSSYGGYGYGGGAASRFNKADPFDSVYETPGWKRAQAQQASRKGGGPMTIEGDLVARSVD
LGGSSSAYTFGDRVLHLKFGYGTVSGVEGNKLTIDFEKAGRKRVLDSFIKRG
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcccggctgctgggcccatcaccagtcagtttggccgacgcgatgccgactat
ctggccgggctcaatgaggagcagcgcgatgccgtcttgtcgctcgaaggcccgctattg
gtgctggccggtgccggtaccggcaagacccgcgttctaacgacccgcatcgcccatatt
ctgaccacccgcaaggcgcgcggttctgaaattctgtcggtcaccttcaccaacaaggcg
gcgcgcgaaatgaaggagcgcatcgccaaactggtcggtgcctcggttgagggcatgcca
tggcttggcacgttccactccatcggcgcccgcatcctgcgccgccacgccgaactggtc
gatctcaaatccgattttaccattttggataccgacgatcagatccgcctgatcaagcaa
ttgctccaggtcgaaaacatcgacgaaaagcgttggcctgcccgccagttcgccgggatg
atggacaattggaaaaaccgtggcctgctgcccaaggatgtctcgcccgccgattccgga
ttctttgccaatgggaaaggccaaaaactttatgcagattatcaggcgcgcctgaaaact
ctcaacgccgccgattttggcgatctgctactcgaatgcatccgcctgttccgcgaaaac
cccgaagttctggccgaataccaccgccgctttcgctatatgctggtcgatgaatatcag
gacagcaacgtcgcccaatatttgtggctgcgtctgctcgcccagggcaaacccgctgcc
gaagccaatatttgcgttgttggcgacgatgatcaatcaatctatggctggcgcggcgcc
gaagtcgataacatcctgcgctttgaaaaagactttcccggcgccagggtcatcaagctc
gagcgcaattaccgctccaccgccaatatcctcaaggccgcctcccatctgatcgccttt
aacgaaggccggttgggcaaaacgctgcagaccgacgtcgccgaagcgggcgatcccatt
gccgttacctccgtctgggatagcgaagaggaggcccgctccatcggcgaggaactcgag
cagatccagcgccggggcgaaaatctcaacgacgccgccattctggtgcgggcgtccttc
cagatgcgcgagtttgaagaacgcttcatcacccttggccttaactaccgtgttattggc
ggtccgcgcttttacgagcgcaaggaaatccgcgatgccctcgcctatttgcggctggtc
gcccagcccgccgatgatctggcgtttgagcggatcatcaacaccccgaagcgcgggctg
ggtgattccacggtcaaaatcctgtttgatgccgctcgtcaccaacgccaaccgcttttg
gccaccgtgcgcatgctgctggaaaccgaagagttaaaacccaagcaacgcaccacattg
cgcaatctcgtcgcccagttcgacgattgggccgagcgcctgcgcaccatcccccatttt
gaactcgccgaacaaattctcgacgagagcggctacaccgccatgtggcaaaacgacaaa
tcccccgacagccccggccgccttgaaaacctcaaggaactggtgcgctcgatggaagaa
ttcgaaacgctcggcggatttctcgaacatatcgccctggtcatggaccgcgccaccggc
gatgatggcgatgccgtctcgatcatgacgctacattcggccaaagggcttgaattcaac
aatgtcttcctgcccggctgggaagaaggccttttcccccatcagcgctcgctcgatgaa
tcgggccgcgccggactcgaggaggaacgccgcctcgcttatgtcggcatcacccgagcc
cgcaaacgcgccctcatctcagtggcgcaaaaccgccgcatccacggtctatggcaatcg
gccatcccgtcgcgtttcttggatgaattgcccgccgacgccgtagaggtcaaagatacc
ggctcctcttatggcggctatggctatggcggcggtgccgcctcgcgattcaacaaggcc
gacccgttcgatagcgtttacgaaacccccggctggaaacgcgcccaggcccaacaggcc
agccgcaagggcggcggtcccatgaccatcgaaggcgatctggtcgcccgctcggtcgat
ctgggcggttcctcctccgcctacactttcggcgaccgcgtcctccacctcaaattcggt
tacggcaccgtctcgggcgttgaaggcaataaactcaccatcgacttcgaaaaagccggc
cgtaaacgcgtcctcgacagcttcatcaagcggggatag
DBGET
integrated database retrieval system
