Devosia rhodophyticola: PSQ90_16280
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Entry
PSQ90_16280 CDS
T09920
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
drp
Devosia rhodophyticola
Pathway
drp00190
Oxidative phosphorylation
drp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drp00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
PSQ90_16280
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSQ90_16280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drp03019
]
PSQ90_16280
Enzymes [BR:
drp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
PSQ90_16280
Messenger RNA biogenesis [BR:
drp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSQ90_16280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
DUF5635
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
WDR05780
UniProt:
A0ABY7YWL2
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All DBs
Position
3318919..3321090
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AA seq
723 aa
AA seq
DB search
MNEMSELSESEVAGPDVQALRSSPARFVNREVSWLQFNMRVLEEASNEAHPLLERLRFVS
ISANNLDEFYMVRVAGLKGQMRAGLTKLSADGLTPTEQIDEIATLAQHLQLEQQDQWQTV
REALFEQNVVIHEADDLGAEQVEYLQKLFREEIFPVLTPIAVDPAHPFPFIPNLGLALAF
ELSRPDGDTPLTALVRLPSNLDRFINLPTSLASEGRSEVVTIDTLVKIFFHKMFPGHEVV
GSGAFRVIRDSEIEIDDEAADLVVEFESALRQRRRGQVIRLEVESSMPRALKRQISEKLS
VKDGDIFEVQGFLGLSDARKICDIDRPDLKFPPYHARFPERIRDHNGDCFAAIRAKDILV
HHPFETFDVVAQFLMQAARDPDVVAIKQTLYRTSADSPIIKALVMAAEAGKSVTCLVELK
ARFDEEANIRWARDLERAGAQVVFGFIELKTHAKLSQIVRREKGKLVSYCHIGTGNYHPI
TAKIYTDLSYFTIDPAITRDVARVFNFITGYARPTELETIAVSPVNLRDTLIANIEREAA
SAKDGRPAWILLKMNSLVDPLLIDALYDASQAGVKVDLIVRGICCLRPGIPGFSDNIRVK
SVVGRFLEHSRIYCFGNGEDMLSPRAKVYISSADLMGRNLDGRVEVMVPILNSTVHKQIL
DRILGAYLRDNQQSWEVLPDGSSHRVRTLDGEEPFNAHDYFMTNPSLSGRGRAGAGEGDE
GID
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatgagcgagctgagcgagtctgaagtcgccggacctgatgtccaggcgctg
cgctccagtccggcccgctttgtcaatcgggaagtcagttggctccagttcaacatgcgc
gtgctggaagaggccagcaacgaggcccacccattgcttgaacggctgcggtttgtttcc
atctcggcaaataacctcgacgaattttacatggtgcgcgttgcaggtcttaagggacag
atgcgggcgggcctaacaaaactgagtgctgacggtctgacgccaaccgaacaaatcgat
gaaattgcgacccttgcccaacatttgcagcttgagcagcaggaccagtggcagacggtc
agggaagcactgttcgaacagaatgttgtcattcacgaagccgatgatctgggtgccgag
caagttgagtacctgcaaaaactgtttcgcgaagaaatattccccgtactgacgccgatt
gcggtcgatccggcgcatccatttccgtttattcccaatctgggtttggcgttggcattt
gaattgagccgccccgatggcgacacgccgttgaccgcgttggttcgcctgccaagcaat
cttgatcgcttcattaatttgccgaccagtctggcgtcagaggggcgctctgaagtcgtc
accattgatacgctggtgaaaatattctttcataaaatgtttcccggccatgaagtggtc
ggctcaggcgcgtttcgggttattcgagacagtgaaattgaaatcgatgatgaggccgcc
gatctcgttgtcgaatttgaaagcgctctgcgccagcggcgacgcggacaggttatccgc
ctcgaggtggaaagctcgatgccacgagcgctcaagcgccagatcagcgagaagttgagc
gtcaaggatggcgatatttttgaagtacagggatttctgggtttatccgatgcccgcaaa
atctgcgacatcgaccgccccgacctgaaatttccgccgtaccacgcgcgctttcctgaa
cgtattcgggatcataatggcgattgcttcgcggcaatccgcgccaaggacattttggtg
caccacccatttgaaacgtttgacgtcgtggcccagttcctgatgcaggcagcgcgcgac
cccgatgttgtggccatcaagcagacactttatcgaacgtcagccgacagcccaatcatc
aaagcgctggtgatggcggctgaagctggcaagtcagtgacgtgtctggttgaactcaag
gcccggtttgacgaagaagccaacattcgctgggcgcgcgatctggaacgagccggggcg
caagttgttttcggatttattgagctcaagacccatgccaagctcagccagatcgtacgg
cgcgaaaagggcaagctggtaagttattgtcacattgggacgggaaactatcacccgata
acggctaagatttacactgatctaagctatttcacaattgatccggcgataaccagggat
gtcgcccgcgttttcaatttcattactggctatgcccgtcctaccgaactcgagaccatc
gcggtctcaccggttaatctacgcgatacgctgatcgcgaatatcgagcgggaagccgcc
tccgccaaggacggacggcctgcctggatcctgttgaaaatgaactcactcgtcgatccg
cttttgattgatgcgctttatgacgcgagccaagcgggcgtcaaagtcgatctgatcgtt
cgggggatatgctgccttcggcctggaatacccggattttcggacaatattcgggttaag
tcggtggttgggcggtttcttgagcacagccggatctattgctttggcaatggtgaggat
atgctctcgccgcgcgctaaggtctatatttcctcagctgaccttatgggacgaaatctg
gacggacgggtcgaagtgatggtaccaatcctgaattcgacggtgcacaagcagattctt
gatcgcattctcggtgcctatttgcgtgacaaccagcagagctgggaagtgttgccggat
ggcagttcgcatcgtgtgcgcacgctggatggtgaggagcctttcaacgcacatgattac
ttcatgaccaacccctctctgtcggggcgcggacgcgctggtgccggggagggcgacgag
ggcatcgattga
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