Dehalobacter restrictus: DEHRE_03960
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Entry
DEHRE_03960 CDS
T02996
Name
(GenBank) chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
drs
Dehalobacter restrictus
Pathway
drs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEHRE_03960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drs03019
]
DEHRE_03960
03110 Chaperones and folding catalysts [BR:
drs03110
]
DEHRE_03960
03029 Mitochondrial biogenesis [BR:
drs03029
]
DEHRE_03960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
drs04147
]
DEHRE_03960
Enzymes [BR:
drs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DEHRE_03960
Messenger RNA biogenesis [BR:
drs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DEHRE_03960
Chaperones and folding catalysts [BR:
drs03110
]
Heat shock proteins
HSP60 / Chaperonin
DEHRE_03960
Mitochondrial biogenesis [BR:
drs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DEHRE_03960
Exosome [BR:
drs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DEHRE_03960
Exosomal proteins of other body fluids (saliva and urine)
DEHRE_03960
Exosomal proteins of breast cancer cells
DEHRE_03960
Exosomal proteins of colorectal cancer cells
DEHRE_03960
Exosomal proteins of bladder cancer cells
DEHRE_03960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHF09341
LinkDB
All DBs
Position
complement(776026..777678)
Genome browser
AA seq
550 aa
AA seq
DB search
MRLTIGSSLGFSGTARNEIAKGVYAVADLVQTTMGPMGKNVIIERRYGYPLVTKDGVTVA
RHIVLLDPAPSVGVKLCQEVAQKTNDLVGDGTTTSIVLFASMVRQGMKLLEAGYNSQQLK
KGMELALQSACDKLEKMSIPADSIEKILSVSTVSSKDMKIGRLIAEAMERVGINGIITVG
SSQQKKSFVEVSSGLEIEKGYTTPNFITKGDRMMIELEEAFVFMTDCPITTVNEMDKILN
WCVANKRSLLLIANDIRRDALGALVWAKKSGRVNGVAIEAMGSGQQRLDFLEDIAVYTGG
SVVSTLLGSSLDSCRVSTCGKADRIVVTGGKTVISNGQGKTEDIEKRIRQLRTLLEMSSS
KEEQAVFKNRIANLSDGIAVIQVGGITDIEMQELKYRVEDGVHAAQTAVISGILPGGGKA
AWWVAQNLKDELESIKLVGKNELNDGLAKGYEIVIKAMEEPMIQMLKNAGKDYVQIIKSL
NSVQSWVGFDIVTNQMTDMLRGGIVDPSLTIISSLRNSISSASMLLTCEALVGEGLFTKS
QPELKDLTTY
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacaatcggttcatccttgggtttttcaggaacagcaagaaatgaaatagcc
aaaggtgtatatgccgtggcagatttggtgcaaacgacgatgggtccgatggggaaaaat
gtaatcatcgaaagaagatatggttatccattggtaacaaaagatggtgtaaccgtagcc
cggcatattgtccttttagatccggctccatccgttggcgtaaaactttgtcaagaagta
gcacaaaagacaaacgatttagttggcgatggaacaacgacttccattgtcttgttcgca
tccatggtaaggcaagggatgaaactcttggaggccggctataattcacaacaactgaaa
aaaggcatggagttggctttgcaatcagcctgcgacaagttagaaaaaatgagtattccg
gctgactcgattgaaaaaatactaagtgtttcaacggtctcctcgaaagacatgaaaata
ggaaggcttattgccgaagccatggaaagggtaggaataaacggaattattacagtgggt
tccagccaacaaaagaagagcttcgtcgaagtaagttccggtctggaaattgagaaagga
tataccactcccaatttcattaccaaaggtgaccgtatgatgattgaacttgaggaagcg
tttgtgtttatgactgactgccccataacaacagtcaatgaaatggataagattctcaat
tggtgtgtcgctaacaaaagaagcttgctgctaatagccaatgatattcgaagagatgct
ttaggtgctttagtctgggccaagaagagcggcagggtaaacggggtggccattgaagcg
atgggttccggacagcagagactagattttcttgaagatattgcggtgtatacgggtggc
agtgttgtctctacgttgttgggaagttctttagatagttgtagggtatcaacttgcggg
aaggcggaccggatcgtcgtgacaggcgggaagaccgttataagcaatggtcaaggtaaa
acagaggatatagaaaagcgcatcaggcagctcagaaccttgttagagatgagttctagt
aaagaagagcaagctgttttcaagaatcgaattgccaatttgtcagatggtatagctgtt
attcaagtagggggcataaccgacattgaaatgcaggaattgaaataccgggtggaagat
ggggttcacgcagcccagacagctgtgatatccggtatcttgccgggaggtgggaaagca
gcctggtgggtggcccagaacttaaaagatgaacttgaaagtataaagctggtgggcaag
aacgaattaaatgatggattagcaaagggttatgagatcgtgatcaaagctatggaagaa
cccatgatccaaatgctgaaaaatgccggcaaagactatgtgcaaattattaaatcactc
aactccgtacaatcttgggttggcttcgacattgttaccaatcagatgacggatatgctg
agaggtggcatcgtagatcccagtttgaccataattagctcattaaggaacagtatcagt
tctgcttccatgctattaacctgtgaggctttggtgggtgaagggttatttaccaagtct
caacctgagcttaaagatctgactacttattga
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