Dehalobacter restrictus: DEHRE_04375
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Entry
DEHRE_04375 CDS
T02996
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
drs
Dehalobacter restrictus
Pathway
drs00220
Arginine biosynthesis
drs00240
Pyrimidine metabolism
drs00250
Alanine, aspartate and glutamate metabolism
drs01100
Metabolic pathways
drs01110
Biosynthesis of secondary metabolites
drs01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DEHRE_04375 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DEHRE_04375 (carB)
00220 Arginine biosynthesis
DEHRE_04375 (carB)
Enzymes [BR:
drs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DEHRE_04375 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MGS
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
GARS_A
ATP-grasp_5
ATP-grasp_2
ATPgrasp_ST
Isochorismatase
DUF2827
Motif
Other DBs
NCBI-ProteinID:
AHF09409
LinkDB
All DBs
Position
complement(860221..863445)
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AA seq
1074 aa
AA seq
DB search
MPKRTDINKILIIGSGPIVIGQACEFDYSGTQACKALRKLGYKIVLVNSNPATIMTDPGI
ADVTYIEPLNLESLTKIIAKERPDALLPNLGGQSALNLSSELHQAGVLTKYNIKVIGVQL
DAIERGEDRIAFKETMNRLGIEMPLSKAAYSVEEAEAIAQELGYPVVIRPAYTMGGTGGG
LVYNAEELNVIASRGIAASLVGQILVEESVLGWEELELEVIRDAKNQMITVCFIENIDAI
GVHTGDSFCSAPMLTISPELQERLQKYSYSVVEAIEVIGGTNVQFAHDPKTGRVVIIEIN
PRTSRSSALASKATGLPIALISSMLAAGLTLDEIPYWRDGSLDKYTPSGDYVVIKFARWA
FEKFPGSVDKLGTQMRAVGEVMSIGKSYKEAVQKSIRSLETNRYGLGFAKDFHQRSLEEL
MAMLAEPTSERQFILYEALRKGADINDLYALTYIKPYFLQQMKELVLLEEEILKYSGKNL
PDELLTQAKKDGFADRYLAMLLNLSEAEIRKQRAALGVVEGWEAVPVSGVEDAYYYFSTY
NAPDKTTSSNQPKVMILGGGPNRIGQGIEFDYCCVHTAFALRDLGYETVIVNCNPETVST
DYDTSDKLYFEPLTVEDVLSIYEKEKPLGVIVQFGGQTPLNIADELKKAGVKILGTTPET
IALAEDRDLFRKMMEKLDIPMPESGMAVNLEEALVIADRIGYPLMVRPSFVLGGRGMEVV
HDAEMLSRYMAAAVGVTPDRPILIDRFLSNAIEAEADAIADGKDAFVPTVMEHIELAGIH
SGDSACVIPPINIPEKHLATIVEYTKKIAQEMNVIGLMNMQYAIADDKVYVLEANPRASR
TVPLVSKVCNISMARIATEIMMAVNDGKETSVKNFTSKTVPYFGVKEAVFPFNMFTEVDP
VLGPEMRSTGEVLGLADSFGLAYYKAQEATKSPLPESGTVLISVNDDDKPAALEVARSFA
QTGFKIMATEGTHKFLLENGIEAEKIKKLYEGRPNIVDSITNKEIHLVINSPSGKRSKHA
DAYIRKAAIKYKVPYITTMTAAAASAKGIAAYDANGASGITLKSLQEYHAEIKR
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaaccgatattaataagatcctgattattgggtcaggtcccatcgtaatc
ggacaagcctgcgagtttgactattcgggaacccaggcctgtaaagcgcttcgcaaactg
ggctacaagattgtactggtcaattccaatcctgccaccatcatgacagatcccggaatt
gctgatgtcacctatatcgaaccattaaaccttgaaagtctgacgaaaatcattgccaaa
gaacgtcccgatgccctgctgccaaatttgggcggtcagtcggccttgaacctttcctcc
gagctgcaccaggcaggcgtccttacgaagtataacattaaggtcatcggtgttcagctg
gacgcgattgaacgtggtgaagaccgaattgctttcaaagaaaccatgaacaggctcggc
attgaaatgcccctcagcaaagcggcctacagtgtagaagaggcagaagcgattgcccag
gaactcgggtatccggtggttatccgcccggcctacaccatgggtggaaccggcggcggt
ctggtttacaatgctgaagaactgaacgtaattgcgagccgcggtattgccgcaagcctg
gtcggtcagattttggtggaagaatccgtacttggctgggaagaactcgagctcgaagtc
atccgtgatgccaaaaaccagatgatcaccgtatgttttattgaaaatatcgatgcgatc
ggtgtccacaccggcgattctttttgttcggccccaatgctgacgatcagtcctgagctt
caggagcgcctgcaaaaatattcttattctgtcgtcgaagccattgaagtcattggcggc
accaatgtgcagtttgcgcatgatccgaagaccggtcgggttgtcatcattgagatcaac
ccgcgaacttcccgatcctcagcgctggcctccaaggcaacaggtctgccgattgcgctg
atctcttccatgctggcggcagggctgaccctggacgaaatcccttactggagagacggc
tctctggacaaatacacaccttcaggcgactacgttgttatcaagtttgcacgctgggcc
ttcgaaaaatttcccggttcggtggacaagcttggtacccagatgcgcgccgtcggcgaa
gtcatgagtatcgggaaaagctacaaagaagcggtgcaaaagtccattcgctctctcgag
accaaccgttacggcctgggctttgcgaaagatttccaccagcggtctctggaagaacta
atggccatgctagctgaaccgaccagcgagcgtcagtttatcctttacgaagcgctgcgc
aaaggcgcggatatcaatgatctgtacgctttgacctatatcaaaccttacttcctgcag
cagatgaaagaacttgtgctactggaagaagaaatcttaaaatacagcggcaaaaatctg
ccggatgaactgctgacccaggccaaaaaagacggctttgcagaccgttaccttgcaatg
ctcttaaacttaagtgaagcggagattcgcaaacagcgagctgccctaggggtagtggaa
ggatgggaagctgttccggtaagcggcgttgaagatgcctactattatttctctacctat
aatgctcccgacaagaccacaagcagcaaccagccaaaagtaatgatcctcggcggcgga
ccgaaccggatcggtcagggcatagagttcgactactgctgcgtgcataccgcctttgcg
ctgcgtgatcttggctacgagaccgtcatcgtgaactgcaatcccgaaacggtctccacg
gactacgatacctccgataagctttattttgaaccgcttaccgtcgaagatgttctgagc
atctacgaaaaagaaaaaccgctcggcgtaatcgtgcagtttggcggccagacaccactg
aacattgcagatgagctcaaaaaagccggtgtcaaaattcttggcacaactcccgaaacc
attgcgctggctgaagaccgtgatttgttccgtaagatgatggaaaagctcgatattcca
atgccggaatccggaatggccgtcaacctggaagaagcgcttgttatcgctgaccggatt
ggttatcctctgatggtccgtccttcgtttgttttgggtggacgcggcatggaagttgtt
cacgacgcagagatgctaagccgttacatggcagctgcggtaggcgtgacgcccgaccgg
ccgattctaatcgaccgtttcctgagcaatgcgatcgaagcggaagccgacgcgatcgcg
gacggcaaggatgcttttgtgccgaccgtcatggaacatatcgaactggccggtatccac
tccggagactctgcctgcgtcatcccgccgatcaacatccctgaaaaacacctagcgacg
attgtggaatacacgaaaaaaattgcccaagagatgaacgttatcgggctgatgaacatg
caatatgcaattgccgacgacaaggtttatgtcttggaagcaaatccaagagcttcaagg
accgtaccactcgtatccaaagtctgtaatatttccatggcccgtattgcgaccgaaatt
atgatggctgtcaatgatggtaaggaaacatccgtcaaaaactttacttccaaaacagta
ccttattttggagtcaaggaagcagtcttcccgtttaatatgtttaccgaagttgaccct
gtgctcggaccggaaatgcgttcgaccggcgaagtgctcggcctggccgattcgtttggt
ctggcctactacaaagcacaggaagcaaccaagtccccgctgccggaatcaggtactgtg
ctgatcagcgttaatgacgacgataagcctgccgcactcgaggtggccaggagctttgct
cagaccggctttaagatcatggctacggaagggacccacaaattcctgctggagaacgga
atcgaagccgaaaaaatcaagaagctgtatgaaggccgtccgaacatcgtggatagtatc
accaacaaggaaatccatctggtgatcaattcgccgtccggcaaacgcagcaaacatgca
gatgcctatatccgcaaagcggcaattaagtataaggttccgtatatcactacgatgacc
gctgcagcggcaagcgccaaaggcattgccgcctatgacgcgaatggtgcatctggaatt
accttaaagtccctgcaggaatatcacgctgagattaaaaggtaa
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