Dehalobacter restrictus: DEHRE_05095
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Entry
DEHRE_05095 CDS
T02996
Name
(GenBank) primosomal protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
drs
Dehalobacter restrictus
Pathway
drs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DEHRE_05095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drs03400
]
DEHRE_05095
Enzymes [BR:
drs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DEHRE_05095
DNA repair and recombination proteins [BR:
drs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DEHRE_05095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
ResIII
Zn_ribbon_PriA
PIF1
AAA_30
nSTAND3
AAA_22
Zn_ribbon_6
AAA_16
nSTAND6
DUF5839
nSTAND_NTPase5
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AHF09530
UniProt:
A0ABN4BRB1
LinkDB
All DBs
Position
1014904..1017225
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AA seq
773 aa
AA seq
DB search
MSGYAEVLIDVANRRLDQSFHYYIPDNLVIHLGMMVVVPLKYRKVRGLVVSISSDPPELD
GEPKFRSIEAVLEENYLIPLELIELACWLSETTICPKAQALHSVWPFLKGKGETWMTSMA
SMDDEDVKVLELLDPDTFQVLKTLNRSRRGGLPENVLLKRSGAKKELLEDMLKQGWIKKE
IRFSAKAGSPDMNERKKNNIENKIDIDTDKDIDADTRNNIEQITAGSVWHITGTLSPAQE
KAFQDILAFRNKNDGGTVLIHGITGSGKTEIYKELVAKVLAEGGDVILLVPEISLTSQIS
RIFLEQFGDIVGIIHSGISSGDKLAIWEQILQRNKRVIIGARSAVFAPLSNLKLIILDEE
HDNAYKQDENPKYHARDVARKRMEDRGGLVLLGSATPSLEAYAAAQRDKIGLVSLEERFN
QRALPAVDIVDMKQELASGNKTMFSMVLRNKLQERIDNGEQSILFLNRRGYSTFVFCREC
GYVARCPHCDVSLTYHSHNQQLCCHYCNYQQDVFHRCPECNSRFIRFFGQGTQKVEEEVS
ALFPGVEVLRLDTDTTSGSREYNRILERFRSGEVPILVGTQMLAKGLDFPNVTLVGVISA
DQLFNMPDFRSRERAFQLLTQVAGRAGRGAKGGEVVIQTYSPEERSIQRAAKQDYAAFFW
EEITYRKQQSYPPFAHIIRIMIFHEKEDRVIKAAQDLANSIRLVLADLNQEYVILGPAPA
VLTRLKNEFRWQVSVKGKNPAVLRRIVHQGVRAFYLGTASSGINISIEVNPLS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggatacgcagaggtgctgatcgatgtcgccaacaggcgtcttgatcagagtttt
cattattacattccggacaatctcgtaattcatttggggatgatggtggttgtcccgctt
aagtacagaaaagtccggggcctcgttgtcagtatcagttccgacccgcctgaactcgac
ggtgagcccaaattccgcagcatagaagcggtcttggaggaaaactatctaattccactg
gagctcatagaattggcctgctggctttcggagacgacgatctgcccaaaagcgcaagcc
cttcattcagtgtggccttttttaaagggaaagggagaaacctggatgacttccatggcc
agcatggacgatgaggacgttaaagttttggagcttctcgatccggatacatttcaggtc
ttaaaaacccttaacaggtcgcgccggggaggtctgccggaaaatgtcctgctaaaaaga
agcggagcgaagaaagaactgcttgaggatatgcttaagcagggatggatcaaaaaagaa
atccggttttccgcaaaagcaggcagtcccgacatgaatgaaagaaaaaaaaataacata
gagaataaaattgatatagacacagataaagacatagacgccgatacaagaaacaatatt
gagcagataacagctggttccgtttggcacattacaggcacattaagtcctgcccaggaa
aaagctttccaggatattctggcgtttcgcaataaaaatgatggcgggacggttttgatc
catgggataaccggcagtggcaagacagagatttataaagagctggtggcaaaggtactg
gctgaaggcggcgatgttattctgcttgtacctgagatttcacttacttctcagatctct
agaatatttctggaacagttcggagatattgtcggaattattcattcaggcatcagctcc
ggcgataaactagcaatttgggagcaaattctgcaacggaataagcgcgttattatcgga
gcgcgctccgctgtttttgcgcctctgtcaaaccttaaactgatcatactggatgaggaa
cacgataacgcttataaacaggatgaaaacccaaaatatcatgcgcgggacgtcgcacgg
aaaaggatggaagacagaggcgggcttgtacttctgggcagcgctaccccatccctggaa
gcgtatgcggcggcccaaagggataagattggtcttgtgtcactggaagaacgcttcaat
caacgggctttacccgctgtcgatattgtggatatgaaacaggaactggccagcggcaat
aaaacaatgttttccatggtactcagaaacaagcttcaggagagaatcgacaacggagaa
caaagtatcctttttctgaaccgcagaggttattccacttttgtattttgccgtgaatgc
gggtatgtcgcacgctgcccacattgtgatgtttccctgacatatcacagtcataatcag
cagctgtgttgtcactactgcaattatcaacaggatgtttttcaccgctgcccggaatgc
aacagccgatttatccgtttcttcggccagggaactcaaaaagttgaagaagaggtttcc
gctttgttcccaggagttgaagtcttacggctggataccgatacgacctccggttctcgg
gagtacaatagaattctagaacggtttcgcagcggagaggttccgattcttgtcgggacc
caaatgctggctaaagggctggatttcccgaacgttacccttgtcggtgtaatctctgcc
gaccagcttttcaatatgcccgactttcgatccagagaacgagctttccagctgctgact
caggttgctggcagggcaggacgtggggctaaaggcggcgaagtggtgatccagacctat
tcacctgaagaaagatcgatccagcgggcagccaaacaggattatgcagcctttttttgg
gaagagatcacttaccgcaaacagcaaagttatccgccgtttgctcatatcatcaggatc
atgatttttcatgaaaaagaagatcgggtaatcaaagcggctcaggacctggccaacagc
atccgtctggtgcttgctgatctgaatcaggaatatgtgattctgggcccggcaccggct
gttttgaccaggctgaagaatgaatttcgctggcaggtatcggtcaaaggaaagaacccg
gcggtcctccgcaggatcgtccaccaaggagtccgggctttctatcttggaacggccagc
tcagggatcaatatcagtattgaggtgaatccgctatcttaa
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