Dehalobacter restrictus: DEHRE_05480
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Entry
DEHRE_05480 CDS
T02996
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
drs
Dehalobacter restrictus
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drs03032
]
DEHRE_05480
03400 DNA repair and recombination proteins [BR:
drs03400
]
DEHRE_05480
Enzymes [BR:
drs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DEHRE_05480
DNA replication proteins [BR:
drs03032
]
Prokaryotic type
DNA Topoisomerases
DEHRE_05480
DNA repair and recombination proteins [BR:
drs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DEHRE_05480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_GRF
HVO_2753_ZBP
Lipoprotein_9
Toprim_4
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AHF09602
LinkDB
All DBs
Position
1093973..1096066
Genome browser
AA seq
697 aa
AA seq
DB search
MSKTLVIVESPAKAKSISKFLSKNYTVKASMGHLRDLPKSQIGVDVDHNYEPKYIAIRGR
GDLVKELKAAAKTADRVLLASDPDREGEAIAWHLTHLLGLNPEELSRIEFHEITKPTIQN
AVKNPRKLDIHLVDAQQARRVLDRLVGYKLSPLLWRKVKKGLSAGRVQSVAVRMICDREE
EIRNFEPEEYWTLDADFLCRGGSFVAKLLHKQGKKMTISSREQMEEVLQELRAAAFTVGE
VKTKEKRKQPAPPFTTSSLQQEAYRKLNFTPKKTMMLAQQLYEGLDLGKTGTVGLISYMR
TDSVRIADTAQEEAKGFIIETYGETYYPEEPRKFASKGRTQEAHEAIRPTSALRTPESVK
GFLGREQFKLYRLIWDRFVASQMSAAVYDTITVDVLAGDYLLRANASAVKFPGYLTVYEE
STDEPEKLDNEENCLKGDLAIGQKLQLRQLQEKQHFTEPPARFTEATLVRKMEEEGIGRP
STYAPTIETIQTRGYVAKEDKKLVPTELGEIVINLLKEHFPDIVDQEFTANMEEKLDDIE
DGKSDWKKIVGEFYGPFAETLDKAEQKIGKIKVEDEVSDEVCELCGRNMVIKMGRFGKFL
ACPGFPDCRNARPLLEEIGVNCPKCGEKLVVRRSKKGRKFYGCSKYPDCDFISWEKPAPH
PCPECGGVMTEKSTRKNKKYVCTNHDCRFTEEIKETE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaactttggttatcgttgaatccccggccaaggcaaaatctatcagcaaattc
ttgtctaagaattatacggtcaaagcttccatggggcatttgcgggatttgccaaagagc
cagatcggggttgatgtcgatcataattatgagccgaaatacattgcaatcagaggacgc
ggcgatttggtcaaagagcttaaagctgcagctaaaactgccgatcgtgttttgctggcg
tccgaccccgacagggaaggtgaagcgattgcctggcacttgacgcacttgctcggtctg
aatcccgaagagttgagcaggatcgaatttcatgaaataacaaaaccaacgattcaaaat
gccgtaaagaatccccgtaaactggatatacatctcgtagatgcccagcaggcgcgcagg
gttttggacagactggtgggctacaaattaagcccgcttctgtggcggaaagttaaaaaa
ggtttaagtgccggacgtgttcaatctgttgcggtcagaatgatctgtgacagagaagaa
gaaatccgcaactttgaaccggaagagtactggactctggatgcggattttttgtgtcgg
ggcggcagttttgttgccaaactgcttcataagcagggcaaaaagatgacaatttcgagc
cgcgagcagatggaagaagtattgcaggaactccgggcggccgcattcacggtcggagag
gtgaaaacgaaggaaaaacgaaaacagccggcacctccttttacgaccagcagtcttcag
caggaggcctaccgcaaattaaactttacacctaaaaagacgatgatgctggcccagcag
ctctatgaaggacttgatctcgggaagaccggtacggtcggattaatttcgtatatgcgt
acggactctgtccggatcgccgacactgcacaggaagaggccaaaggttttatcatcgag
acttacggcgaaacctattatcccgaggagccgaggaaatttgccagcaaaggccggacc
caggaagcgcacgaggcaatcagaccgacatccgctctcagaacgcctgaatccgtcaaa
ggctttctcggacgagagcagttcaagctttaccggctgatctgggaccgttttgtcgcc
agtcagatgagtgcggcggtttatgatacgattaccgtagacgttctggccggtgattac
cttttaagagccaatgcttcagccgtgaagtttccgggatatctcactgtctatgaagaa
agcaccgatgaaccggaaaaactggataatgaggaaaactgcttgaaaggagatctcgcc
atcgggcagaagctgcagttaaggcagcttcaggagaagcagcatttcaccgaacccccg
gcgcgttttactgaggcaaccttggtccgaaaaatggaggaagaggggatcgggcgtccg
agtacgtatgcgccgacgattgaaacgattcaaacgaggggctatgtagcaaaggaagac
aagaaacttgttccaaccgaactaggtgaaattgtgattaacttgctgaaagagcatttt
ccggatattgtcgaccaggagtttacagccaacatggaggagaaacttgacgatatcgaa
gacggaaaatcggattggaagaaaattgtcggagaattttacggcccgtttgccgagaca
cttgataaagctgagcagaagatcggcaaaatcaaagttgaggatgaagtttcagatgag
gtctgtgaactttgcggcaggaatatggtcatcaagatgggacggttcggaaagtttttg
gcttgccctggttttcctgactgccggaatgcgcgacctttactcgaggaaatcggcgtg
aactgcccgaaatgcggagaaaaacttgtcgtcaggagatcgaaaaaaggacgtaagttt
tacggctgcagcaaatacccggactgtgattttatttcctgggagaaaccggcacctcac
ccttgtccggagtgcggcggggtaatgaccgagaaaagtaccagaaaaaacaaaaaatat
gtctgcaccaatcatgactgcaggtttaccgaagaaatcaaggaaacagaataa
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