Dehalobacter restrictus: DEHRE_05985
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Entry
DEHRE_05985 CDS
T02996
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
drs
Dehalobacter restrictus
Pathway
drs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEHRE_05985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drs03019
]
DEHRE_05985
Messenger RNA biogenesis [BR:
drs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DEHRE_05985
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
AHF09678
UniProt:
A0ABN4BVJ4
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All DBs
Position
1189720..1191267
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AA seq
515 aa
AA seq
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MEISGLIAVVIVLAGLAIGSLIGWFIRKSSAEKMIGSAEIEAKRLLKNAEAEAEAKKREK
IVAAKEEVMQLRNDIEKETRERRSEIQRMERRNLQKEETLERKTEALERKEENLHRRESD
VEKQKLDLNELLAKQVAELERLSGLTPEEAKQLLLKSVEEEVRYESAIMIKEYETRTKEE
AEKRAKDIISLAIHRCAADHVVESTVSVVALPNDEMKGRIIGREGRNIRALETLTGIDLI
IDDTPEAVILSGFDPIRREVARVALEKLILDGRIHPARIEEMVEKAQKEVDQKIREEGEQ
ATFETGVHGIHPELIRLLGRLRFRTSYGQNVLRHSIEVSHLAGLMASELGVDVQTAKRAG
LLHDIGKAVDHDTEGTHVEIGVDLCKKYKESWDIIHAIEAHHGDTEPKTIVAVLVAAADA
VSAARPGARRETLESYIKRLQKLEEIAETFEGVEKSYAIQAGREIRIIVNPEKIDDALAP
RFAHDIAKRIEEELEYPGQIKVVVMRETRAVDYAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttggaaatatcaggcttaattgcagttgttattgtactcgccggattggcgattggcagt
ctgatcggctggttcatacgcaaatcatctgcggaaaaaatgattggatctgctgaaata
gaagcaaaaaggcttttaaagaatgctgaggcagaagctgaagccaaaaaaagggaaaaa
atcgttgcagctaaagaagaggttatgcagcttcgcaatgatattgaaaaagagaccaga
gaaagacgtagcgagatccaacgtatggaaagacgcaatcttcagaaggaagaaaccctt
gaaagaaaaaccgaagctctggaacgtaaggaagaaaatttacatcgcagagaatcagac
gttgaaaaacaaaaacttgatttaaatgaactcctggctaaacaggtagctgagctggag
aggctttccggtctgactcctgaagaagccaaacaattgctgctaaaaagtgtcgaggaa
gaagtacgttacgaatcggcaatcatgattaaggaatatgagacccggacaaaagaagaa
gctgaaaaacgcgctaaagatattatttctttggctatacatcgttgtgcggcagaccat
gtcgttgaaagcacagtttcagtggttgccctgccgaacgatgaaatgaaaggccgtatc
attggccgagagggccggaatatcagagctcttgagactttaacgggcattgatttgatt
attgacgatacgcctgaggccgttattctgtcaggatttgatccgatcagaagagaagtt
gccagagtcgctctggaaaaactgattttggacggacgtattcatccggccagaattgaa
gagatggttgaaaaggcgcagaaggaagttgaccagaaaatcagggaagaaggggaacag
gcaaccttcgaaaccggggttcacggtatacatccagaactgattagactgcttggccgg
ctgcgtttcagaaccagttacggacaaaatgttttgagacactctatcgaggtatcccat
ctggccgggttaatggcttccgaacttggtgttgatgtccagaccgcaaaacgcgccgga
cttttgcatgacatcggcaaagccgttgaccatgataccgaaggcacgcatgtcgagatt
ggcgttgatctctgcaaaaagtacaaggaatcatgggatatcattcacgcgattgaggcc
catcacggcgacactgaacccaagacaattgtcgcagtacttgttgccgctgcagatgcg
gtatcagctgccagacctggtgccagacgcgaaactttggaatcctacattaaaaggctt
cagaagcttgaggaaattgccgagacatttgaaggcgttgaaaaatcctacgcgattcag
gccggcagagagattcgcattattgtgaatccggagaagattgatgatgcacttgcacca
aggttcgcgcatgatattgcaaagagaattgaagaagaactggaataccccggacagatc
aaggttgtcgtaatgcgggagacccgcgcagtagattacgcgaagtaa
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