Dehalobacter restrictus: DEHRE_06040
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Entry
DEHRE_06040 CDS
T02996
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
drs
Dehalobacter restrictus
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
drs03016
]
DEHRE_06040
Enzymes [BR:
drs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
DEHRE_06040
Transfer RNA biogenesis [BR:
drs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
DEHRE_06040
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
HVSL
APOBEC3
Motif
Other DBs
NCBI-ProteinID:
AHF09689
LinkDB
All DBs
Position
1199737..1200276
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AA seq
179 aa
AA seq
DB search
MRLFISLNFSEHSLDQFEKWQDELKVKGLRGYWRRRDNLHLTLRFLEEVEEKDLDALQQT
LTGVSGRIGEFAVAFDSLGVFPNIIQPRILWAGIRKEPKLIQLQKQIQHATSQFGAPPDT
RPFKPHLTLASGGIKGIDQNILNWGSTLDLKETAVHYALMQSKVEKGIRQYLTVARYRI
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcgattatttatcagcctgaattttagtgaacacagtcttgaccaattcgaaaaatgg
caggatgaacttaaggttaaaggtctccgcggctattggcgcagacgtgataacttgcac
ctgacgctgcgttttttagaagaagtggaagaaaaggatcttgatgctttgcaacagacc
ctgacgggtgtttcgggacgtatcggtgaatttgcggttgcttttgattcccttggtgtc
ttcccgaatatcatacagcctcggatactatgggccgggataagaaaagaaccgaagctg
attcagctgcaaaagcagatccagcacgcgacgagccaatttggagcaccgcctgatacc
aggccttttaaacctcatcttactttagcgagcggcggcatcaagggtatcgaccaaaat
atcctaaattggggcagtacgcttgatcttaaagagactgccgtccattatgctttaatg
caaagcaaagtggagaaaggcattcggcaatacctgacagttgcccggtaccggatctga
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