Dehalobacter restrictus: DEHRE_07595
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Entry
DEHRE_07595 CDS
T02996
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
drs
Dehalobacter restrictus
Pathway
drs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEHRE_07595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drs03019
]
DEHRE_07595
03009 Ribosome biogenesis [BR:
drs03009
]
DEHRE_07595
Enzymes [BR:
drs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DEHRE_07595
Messenger RNA biogenesis [BR:
drs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DEHRE_07595
Ribosome biogenesis [BR:
drs03009
]
Prokaryotic type
rRNA helicases
DEHRE_07595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AHF09965
UniProt:
A0ABM5P603
LinkDB
All DBs
Position
complement(1493134..1494579)
Genome browser
AA seq
481 aa
AA seq
DB search
MHQVSFDQYPLSPEILKALQLLNYDKPTNVQKQVIPLFLAQKDVIVKSQTGSGKTAAFAI
PLCQMVDWEENKPQALIITPTRELAIQVKEDLFHIGRFKRLKIAAVYGKSPFYYQEKELK
QKTHIVVGTPGRLIDHFQKGTLDTSCIKYLVIDEADELMNMGFLEQTETILGSLSADRVT
ALLSATMPSDVRTLCDHYLREPVYVETQEETSAAERISQERYLIARQDKIKLLKDLSVTE
NPDSCLIFCNTKHQVDEVYAELKLLDYPCAKIHGGMEQGHRLSVMDDFKRGYFRYLIATD
VAARGIDIEDISLVINFDLPQEKESYVHRIGRTGRLNKNGKAISFVTKEDDIYLQDIQKY
VGQEIPLKQRPSQDTVRNAEAVFQEKITVLPDNKAMKGTRINLEIMKLQINAGKKSKIRP
ADIVGALTNIAGMTAADIGIINILDELSYVEILNFKGSLVLEALQTTPLKGKLRKVRKVN
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaggtttcttttgaccaatatccgttaagtccggaaatattaaaagcccttcag
ctgctgaactatgacaagcctacgaacgtccagaaacaggtcatcccattgtttctggcg
caaaaagatgtgattgttaaatctcagaccggcagcggcaagacggccgcttttgctatt
ccgctttgccagatggtggattgggaagaaaataaaccccaggccctgatcatcacgcca
acgagagaactggccatccaggtcaaagaggatctgtttcatatcggccgttttaaaaga
ctaaaaattgctgcggtatacggcaaatctcctttctattatcaggagaaagagctgaag
caaaaaacgcatattgtggtgggaacgcctggccggctgatcgatcattttcagaaaggg
acgctggatacttcttgtatcaaatacctggttattgacgaagcggatgaactgatgaat
atgggctttctggaacagacggaaaccatccttggcagcttgtctgccgaccgcgtaaca
gccctgctgtcggccacgatgccttctgatgtcagaacactgtgtgatcattatttgcgc
gagccagtctatgtagaaacgcaagaagaaacatccgctgcggaaagaatctcccaggaa
agatacctcattgccagacaggataaaataaagcttcttaaagatctttcagtcactgag
aatcccgatagctgtctgattttctgcaataccaaacatcaggtggatgaggtctatgcg
gaattgaaattgctcgattatccctgcgccaaaattcatggcggtatggaacaagggcac
cgcctgagtgtcatggatgattttaaacggggttattttcggtacctgattgcaacagat
gtggcagcccgggggattgatatcgaagatatttcactcgtcattaactttgatctgccg
caggaaaaggaaagctatgtacaccggattggcagaacagggcgtttgaataaaaacggc
aaagcaatctcttttgttaccaaagaagatgacatttacctgcaggatatacagaaatat
gttggacaggagatcccactgaaacaaagaccttctcaggatactgtccgcaatgccgaa
gccgtctttcaggagaaaataaccgttttgccggataataaagccatgaaaggcacccgg
atcaatttggaaatcatgaagctccagatcaatgccggaaagaaatccaagatccggccg
gcggatattgtgggcgcactgacgaatattgcgggtatgactgcggctgacatcgggatt
atcaatattttggatgaattgagttatgtggaaatcctgaactttaaagggtcacttgtc
cttgaagccttgcaaacaacgccgctcaaaggtaaactgcggaaagtaagaaaagtgaat
cgctga
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