Dehalobacter restrictus: DEHRE_08995
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Entry
DEHRE_08995 CDS
T02996
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
drs
Dehalobacter restrictus
Pathway
drs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DEHRE_08995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drs03400
]
DEHRE_08995
Enzymes [BR:
drs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DEHRE_08995
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DEHRE_08995
DNA repair and recombination proteins [BR:
drs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DEHRE_08995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF1631
Zn_ribbon_9
Motif
Other DBs
NCBI-ProteinID:
AHF10202
LinkDB
All DBs
Position
complement(1797322..1798143)
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AA seq
273 aa
AA seq
DB search
MPELPEVESIRLSLAARILGKTIEDVEVRWPPAAVSLADEDFSALARNRTIESLDRRGKY
LLMNLSHGLTMIIHFRMTGRLIYYPEQHEPNKHTHVVFRLDQGELHYSDIRKFGRIQLVS
FQMAFKAACLAKLGPEPLDESFTFDQLGMRLARKKSTIKAALLDQTVVAGIGNIYADEAL
FRAGILPDRNTASLKVSEIILLYDAICEVLQEGITAGGTSFRDYRDADGKKGAFQENLMV
YGRSGQECKYCGGQLAKIKVAGRTTVYCPNCQK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaagtagaaagtatccggctgtccctggctgcaaggattctggga
aagacaattgaagatgtcgaagtccgatggcctccggcagcagtttctctggcggatgag
gatttcagcgctttggccaggaaccggacgattgaaagccttgacagacgcggcaagtat
ctgctcatgaacctgagtcacggccttacgatgatcattcatttcaggatgaccggacgt
ttgatctattatcctgagcagcacgagccaaataaacatacgcatgttgtgtttaggctc
gatcagggggagcttcattactccgatatccgtaaattcggcagaatacaactggtgtct
tttcaaatggcctttaaggctgcctgcttggctaaacttggtccggaaccgctggacgag
tcatttacatttgaccagctcgggatgcgtctcgccaggaaaaagagtacgatcaaggct
gcgctgctggatcagaccgtcgtagccggtatcggaaatatttatgcggacgaggctctg
ttccgcgcgggcattttgccggatagaaatacggcttcgttaaaggtgtcggagattatt
ctgctttacgatgcgatctgtgaggttctgcaggaaggaatcacggctggcggaacatca
tttcgtgattatcgtgatgcagacggcaagaagggtgcatttcaggaaaatctgatggtt
tacggacgcagcggtcaggagtgtaaatattgcggaggtcaattggctaaaatcaaagta
gccggaaggacaacggtgtactgtccgaactgccagaaatag
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