Dehalobacter restrictus: DEHRE_09090
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Entry
DEHRE_09090 CDS
T02996
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
drs
Dehalobacter restrictus
Pathway
drs03030
DNA replication
drs03430
Mismatch repair
drs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DEHRE_09090 (dnaE)
03430 Mismatch repair
DEHRE_09090 (dnaE)
03440 Homologous recombination
DEHRE_09090 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drs03032
]
DEHRE_09090 (dnaE)
03400 DNA repair and recombination proteins [BR:
drs03400
]
DEHRE_09090 (dnaE)
Enzymes [BR:
drs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DEHRE_09090 (dnaE)
DNA replication proteins [BR:
drs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DEHRE_09090 (dnaE)
DNA repair and recombination proteins [BR:
drs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DEHRE_09090 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
BscB_a-b
Motif
Other DBs
NCBI-ProteinID:
AHF10217
LinkDB
All DBs
Position
complement(1812054..1815467)
Genome browser
AA seq
1137 aa
AA seq
DB search
MFTHLHVHTEYSLLDGAARINDLVHSAAELEMPALAITDHGVMYGVLDFYKACGKQGIKP
IIGCEIYMAPGKRTERVLGKDDKNYHLVLLAETNEGYQNLVKIVSQANVDGFYYKPRADK
ELLQQHSKGLIALSACLGGEIPEYLMQDNPARARAAAMEYLDIFGPEHFYLELQDHGITD
QRKVNAGLWDLHRETRIPLLATNDVHYIRKEDASVQDILLCIQTGKTLADSSRMSFEGRE
YYLKSKQEMNLLFGETPEVLRQTNEIAERCNVSFSFGQHYLPVYEVPEGCTLDEYLRELC
WKAFPVFYPEETPEQRERLEYELGIITQTGFSGYFLIVSDFCRYAREHDVAVGPGRGSAA
ASMVAYLLGITSVEPLRHDLLFERFLNPERISMPDIDIDFDPEGREKVIKYVTEKYGEEK
VCQIITFGTMGAKGVLRDVGRVLNIPLSKVDKVAKAVPYELGMTLERALAVSPELQKMVR
EEEEIKKLYEISKSLEGMPRHASTHAAGVVIARDELTSYLPLQKTSDGLLMTQFPMKTVE
EIGLLKMDFLGLRNLTILTKALANIEQARDIRLDLNHLPLDDQATYQLLSEGNSTGVFQL
ESGGMRAILKDLKPNCFEDIIAVNALYRPGPMEQIPEFVRRKHGGLIKVLHSKIEEILRP
TYGIIVYQEQVMQIAQNLGGYSLGRADLLRRAMGKKDKKIMAEEKQNFIYGLQDSGGEWI
VPGALRLGIGEKEAEEIFDLMAKFAEYGFNKGHATAYAMISYQTAYLKANYPLEYTAALL
SSVIGASDKVTFYIQEARSSGIEILPPDVQYSYRDFTIEHGAIRFGLEAIRNVGTQVVDR
IIAERANGPFASFYDFIVRMDAKVLNKRTLESLIKAGAFQSLCSRAQAMKVLDQALELAQ
NRQKDNESGQMSLFDLDQDLDEGLRMPEIPEFSESEILKMEREYIGIYLTAHPLYSVNDL
LRKITSSEIAACLESAEEKKVILGGIINSYRQTITKKGEMMATFLLEDLTGTIEVLVFPR
LFPEVVRMDNDHIVVVHGRYYVNEDEKKIFAEKVLPIEECSVKPDKLFLKIPSNQDTELT
DKILAILGAFRGTHPVYFFCQDNKKTFEISPNYFVRPSEELDRALIALLGNDQVRWQ
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgttcacacatcttcatgttcataccgaatacagtcttctggacggcgcggccagaatc
aatgaccttgtacattctgctgctgagctggaaatgccggcgcttgcgatcactgatcac
ggcgtgatgtacggcgtgctggatttttataaagcctgtggcaaacagggaatcaagcct
atcatcggctgtgagatctatatggctcccggaaaaagaacggaacgggtcctcggcaaa
gatgacaagaactatcatctggttcttcttgccgaaacgaacgagggctatcagaacctg
gtgaaaattgtttcgcaggccaacgtggacggtttttattacaaacctagggccgacaag
gagcttttacagcagcacagtaaaggtttgattgcattgagcgcctgtctgggcggggag
atcccggagtacctgatgcaggacaatccggccagagccagagcggccgcgatggagtat
cttgatattttcggtccggaacacttttatctggagttgcaggatcatggcatcaccgat
cagagaaaggtcaacgccggcctctgggacctgcaccgggagacgcggattccgctgctt
gcgaccaacgatgtccattatattcggaaagaagatgcgtcggttcaggatatcctgctg
tgcatccagaccggaaagacgctggctgacagctccaggatgagctttgagggcagggag
tattatctgaaaagcaagcaggagatgaatttgctttttggggagacgcccgaggtttta
cgccagacgaatgagattgcggagcgctgcaacgtcagcttttcgtttggccagcattat
ctgccggtctacgaggttccggaaggctgcaccctggacgagtacctgcgggaattatgc
tggaaggcgttcccggtattctacccggaggaaacgccggaacagcgcgagcggctggaa
tatgagcttgggattattacccagactggtttttccgggtattttttgattgtgtccgat
ttctgccggtatgcccgggagcatgatgttgcagtcggtccggggcgtggttcagcagct
gcgagtatggttgcgtacttgcttggcatcacctccgtggagccactgcgccatgatctt
ctttttgaacgttttttaaatccggaaaggatatccatgccggatattgatatcgacttt
gacccggaaggccgggaaaaagtcatcaaatatgtaacagaaaagtatggggaagagaag
gtttgccagatcattacgtttggtaccatgggtgccaagggcgtgctgagggatgtcgga
agagtcctgaatataccgctcagcaaagtcgataaagtcgccaaagcggtaccgtatgaa
ttgggcatgacgctggaaagagcgctggccgtttctcctgaattgcagaaaatggttagg
gaagaagaggaaatcaaaaagttgtatgagatttccaagtccctggaggggatgccgcgg
catgcttccacgcatgctgccggcgtcgtgattgccagggacgaattgaccagttacctt
ccacttcagaaaacctccgacgggctcttgatgacgcagtttccgatgaaaacggttgag
gagatcggactgctgaagatggatttcctgggtctgcggaacctgacgatcctgaccaaa
gcgcttgcaaatattgaacaggcccgcgatatccggcttgacctgaaccatttgccgctc
gacgaccaagcgacgtatcagctgctttccgaagggaacagtacaggtgtatttcagctg
gaaagcggtggcatgcgggccatcttaaaagatttgaagcccaattgttttgaagatatt
attgcggtaaacgcgctgtaccggcccggtccgatggaacagattccggagttcgtgcgc
cggaagcatggcgggctgatcaaagtcctgcattcaaaaatagaagagattttaagaccg
acctacgggattatcgtctaccaggaacaggtcatgcagatagctcagaatcttggcgga
tactctcttggacgagcagatcttctgcgcagggccatgggaaaaaaagacaagaagatc
atggccgaagaaaagcagaattttatctacggcctgcaggacagcggcggtgaatggatt
gtgccgggagcgctccgtctgggtataggtgaaaaggaagctgaagagatttttgatctg
atggccaaatttgccgagtacggattcaataaggggcatgccacggcttatgcgatgatc
tcatatcagacagcgtatctgaaggcgaattatccgctcgaatacactgcagcgctgctg
agttccgtaatcggcgcatcagataaagtcactttttacattcaggaagccaggagcagc
ggcattgagattctgccgcccgatgtccagtacagttaccgggattttaccatagaacac
ggagcgatacgtttcgggctcgaggcgatccgcaatgtcgggacacaggtggttgacagg
atcatcgccgaaagagctaacggcccgtttgcgtcgttttatgactttattgtacgcatg
gatgctaaagttctaaacaaacgaacccttgaaagtctgattaaggccggcgcgtttcag
tcactgtgcagccgcgctcaggctatgaaagtcctggatcaggccctggagctggcccag
aaccggcaaaaggacaacgaatccggccagatgtctttgtttgatctcgaccaggacctc
gatgaagggttgcgtatgcctgaaataccggaattcagcgagagcgagatcctaaagatg
gagagggagtatatcggtatttatctcacagcccatccgctttattccgtgaatgaccta
ttaaggaaaatcacgagttcagaaattgcggcctgtctcgaaagtgcggaagaaaaaaag
gtcattctgggtgggataataaattcttatcggcaaacaataacgaaaaaaggggaaatg
atggctaccttcttactggaggatctgaccggaacgattgaggttctggtattccccaga
ttgtttccggaagttgtcaggatggacaacgaccatattgtggttgttcacggtcgttat
tatgtgaatgaagatgaaaagaaaatatttgctgaaaaagttctgccgatcgaggaatgc
agcgtcaaaccggataaattgtttctgaagattccaagcaatcaggatacggaactgacc
gataagatcctggcaatccttggggcatttcgcggaacgcatcctgtctatttcttttgc
caggataataagaagacctttgagataagtccaaattattttgtcaggccatctgaagag
cttgacagggcgcttattgcgcttttgggaaatgatcaggtaagatggcaataa
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