Dehalobacter restrictus: DEHRE_12560
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Entry
DEHRE_12560 CDS
T02996
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
drs
Dehalobacter restrictus
Brite
KEGG Orthology (KO) [BR:
drs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drs03009
]
DEHRE_12560
Enzymes [BR:
drs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
DEHRE_12560
Ribosome biogenesis [BR:
drs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DEHRE_12560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
LURY1
Motif
Other DBs
NCBI-ProteinID:
AHF10796
UniProt:
A0ABM5P8I5
LinkDB
All DBs
Position
complement(2493439..2494332)
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AA seq
297 aa
AA seq
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MKKFQTFRITEEHQGLTVEQYLKSILQCPGRKIQKLTRAGGVRLNKRNAYLQKKIKSGDI
LDVLVLEDQFFGVKPEPGSIDILFEDPALIILYKPAGMLVHPAGQTTGGTLANYLAEYFR
ENGETITIRPLHRLDRDTTGCVVFAKDARTQSELEKQLQDGRLKRKYYAVVRGRIEPPSG
SVDAPIGPHPTLPNRRAVHDQGERALTHYNTIKTFENYSLLELTLETGRTHQIRVHLSSL
GHPVLGDRMYGKRSSLIHRQALHARSVSFCHPVDGKLIEIQAPVPPDLENLISHLSL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattccaaacatttcggattacggaagaacatcagggcttgactgtcgagcag
tatctgaaaagtattttacaatgtcccggcagaaagattcaaaagctgaccagagcaggc
ggagtgcgtctcaataaaagaaatgcttatcttcagaaaaagataaaaagtggggacatc
ttggatgttctcgttttggaagatcagttctttggggttaagcctgagccgggatcgatt
gacattttgtttgaagatccggcacttattattttatataaaccagccggcatgttggtg
catccagcagggcaaacaaccggcggaacgctggctaactatctggcggagtactttcgg
gaaaatggagagacaattaccattcgtcctttacatcgtctagatcgggatactacaggc
tgtgtggtatttgccaaagatgcacgaacccagtctgaactggaaaaacagttacaggat
gggaggctgaaaagaaaatattacgcagtggtccggggaagaattgagccgccatccggt
tctgttgacgcaccgatcggaccgcatccaacactgccgaaccggcgggctgttcatgat
cagggggagcgtgcgcttacccattacaatacgatcaagacttttgaaaattattctctg
ttggagcttacccttgaaaccggaagaacacaccagattcgcgttcatctctcctcactt
ggccatcctgtgctcggagacagaatgtacgggaagcgctcctccctgatacacagacag
gccttgcatgccagatccgtctcgttttgccatcctgtggacggaaagttaattgaaata
caggcccctgttccgcctgatttggaaaacctaatcagccatctttctttatag
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