Desulfohalobium retbaense: Dret_0021
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Entry
Dret_0021 CDS
T00989
Name
(GenBank) SMC domain protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
drt
Desulfohalobium retbaense
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drt03400
]
Dret_0021
DNA repair and recombination proteins [BR:
drt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Dret_0021
TLS (translesion DNA synthesis) factors
Other SOS response factors
Dret_0021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
RsgA_GTPase
AAA_22
AAA_29
BLOC1_2
SHCBP_N
COG6_N
Motif
Other DBs
NCBI-ProteinID:
ACV67323
UniProt:
C8WZ48
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All DBs
Position
complement(22750..24351)
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AA seq
533 aa
AA seq
DB search
MLELLRIRNLALIQDLEMEFDPGLNVLTGESGAGKSFILRALDFILGEKLQTNHVRPGAD
KAVVEAIFHLEGQEYVLRRELNSATGRSRVYINDDLSSQAKIRALRPSLIIHTSQHGQQQ
LLNPNFHTRLLDGDIPRELLGTKEDLLSRYKDILRRLEQLDQSTQDLDAKRELLEYQQQQ
IDQVGPERGEEEQLLERKTTLREQAASQQAVQNCLEILNGAGQPGALDLAGDLQRASQSL
QSINEGLGEHAQHLQEWYEYLKELETELRSQPLPFDSTQELEGIEARLWELAQLQRRLNR
NLDQICDLHEEIEATLSHRDQIGLERQQLERQSQEMHAELIQAVQEVNAAREHTASRLAE
QLRQELVQLGFAEEIQIFFALHDHEVAPGIWEKRARLQWVPNPGQPVQALDEIASGGELS
RFLLGLVCLQSTRELPTLLFDEVDAGVGGVTLNSVGQRLTELSRRQQVVLISHWPQLASR
GQRHFQVAKEIVDGETFTTCHELDAQARFDELARMAGGDEQGLAFAQQLLHNQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaacttcttcgcatccgcaatctggccctgatacaagatctggaaatggaattc
gaccctggcttgaacgttctcacaggcgaaagcggggccggaaaatcattcatcctcaga
gcccttgatttcattctcggagagaaactccagaccaaccacgtccgtcccggcgcggat
aaagccgtggtcgaagcgatctttcacctggaggggcaagaatatgtcctgcgccgtgaa
ctcaactccgccacaggacgcagtcgcgtctacatcaatgacgatctgagttcgcaagcc
aaaatccgggcccttcgccccagtctgatcatccataccagccagcacggccaacaacag
ctcctcaatccgaatttccacacccggcttcttgacggcgacatcccccgggaacttctg
ggaaccaaggaggacttgctcagtcgctacaaggacatcctgcgcaggctggaacagctc
gaccagtccacgcaagatctcgacgccaagcgagaactcctggaataccagcaacagcaa
atcgaccaggtcgggcccgagcgtggcgaagaagaacagctccttgaacgcaagaccacc
ttgcgcgagcaggcggcaagccagcaggcggtacaaaactgtcttgaaatcttaaacggg
gccggacaaccaggagcgcttgatttggcgggagatctccagcgcgcctcccaatcgctg
cagagtatcaatgaagggctgggcgaacacgcccaacatctccaggagtggtacgaatac
ctcaaggaattggaaaccgaactccgttcccaaccgctgcctttcgacagcacccaggag
cttgaaggaatcgaggcccgcctctgggaactcgcccagctccaacgccgcttgaaccgg
aatctggaccagatctgcgacctgcatgaagaaattgaggccaccctttcccatcgggat
cagatcggcctcgagcgccaacagcttgaacggcagtcccaagaaatgcatgccgaattg
attcaggccgttcaggaggtcaacgccgcccgagagcacaccgcctcccgattggccgaa
caactccgccaggaactcgtccagctcggtttcgccgaagaaatccagatttttttcgcc
ctccacgaccatgaagtcgctcccggcatctgggaaaaacgggcccgtttgcagtgggtg
cccaatcccggccagccggttcaggccttggacgaaatcgcctcgggcggtgaattgtcc
cgttttttactgggcctggtctgcctgcaatccacacgcgagctgccgaccctcctgttt
gacgaagtagatgccggtgtcggcggtgtaacactcaacagcgtcggccagcggctcacg
gaattgtcccggcgccaacaggtggtccttatttcccattggccgcaactcgccagccga
ggccagcgccactttcaggtcgccaaggagattgtggacggggaaaccttcaccacctgt
cacgagctcgatgcccaggcccgtttcgatgaattggcgcgcatggctggcggtgacgag
caaggccttgccttcgcccagcaactgctgcacaatcaataa
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