Desulfohalobium retbaense: Dret_0024
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Entry
Dret_0024 CDS
T00989
Name
(GenBank) metal dependent phosphohydrolase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
drt
Desulfohalobium retbaense
Pathway
drt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dret_0024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drt03019
]
Dret_0024
Enzymes [BR:
drt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Dret_0024
Messenger RNA biogenesis [BR:
drt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Dret_0024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ACV67326
UniProt:
C8WZ51
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All DBs
Position
complement(25691..27022)
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AA seq
443 aa
AA seq
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MPQPLKDAIALCKTIRRNGYDAYVISAALQERLLENEEHGEVDIATDMQPSELRKLFPLL
DSSDENADLGSLQEGDMLMRFYPMDTLASSHPEVAASRLTPRLMKKLEDRGELPTALACP
YIPEVPDAYAGFCDFSDGVVNLIGVPDATLRRNYLLGVRALRFAANYDLPMEPNTWVAIL
RSASRILDYVPVSDIVDEWKKVEAENMAQFFELLYETQILHGLIPELAALSKIKQRKSED
EPELETAWQHTLDKMRLYPETLPYDWLGTTACLFHDVGKLYTAEYTDGEWTFHQHPWVGA
KITRKILKRLRFPTEDLEVICHLVRHHKRFDSMLTDRGIRRFKALDEYPRIIEMARADVK
ARGGNYTAFNHNMKYLERADVPEEMLEPLLNGKEIMDFTGLNPGPAVGIIRQALLQAQVA
GDVTSIPEAVEFIRTYYEKEIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaccgctcaaggacgctatcgccctgtgcaaaaccatacgccgcaacggctac
gatgcctatgtcataagcgccgctttgcaggaacgcctgctggaaaacgaggaacacggc
gaagtcgatatcgccactgatatgcaaccctcggaactgcgcaaacttttccccttgctc
gattccagcgacgagaatgccgacctgggctcactccaggaaggcgacatgctcatgcgc
ttctaccccatggataccctggccagcagtcacccggaggttgccgcctctcgcctgaca
ccgcggctgatgaaaaaactggaagaccggggggaattgccgacggccctggcctgtccc
tatatccccgaagttcccgacgcctatgccggcttctgcgacttttccgacggggtcgtc
aatctcatcggcgtcccggacgcgaccctgcgccgcaactaccttttaggcgtccgtgcg
ctgcgttttgccgccaattacgatctgccgatggagcccaacacctgggtggccatcctc
cgctccgcctcacgcatcctcgattatgttccagtcagtgatatcgtggacgaatggaag
aaggtcgaggccgaaaacatggcccaatttttcgaactcctttatgagacccagattttg
cacggtctgatcccggaactcgccgccctgagcaagatcaaacagcgcaagagcgaggac
gagccggagttggagaccgcctggcagcacaccctggacaagatgcgcttgtacccggag
accttgccgtatgactggctagggaccactgcctgtctctttcatgatgtcggcaaactg
tacaccgccgagtataccgacggcgaatggaccttccatcagcacccctgggtcggggcc
aaaatcacccggaagatcctcaaacggctgcgttttcccactgaagaccttgaggtcatc
tgccatctggtccgccaccacaagcggttcgattcgatgctcaccgatcgcggcatccgc
cgcttcaaggccttggacgaatacccccgaatcattgaaatggctcgtgccgacgtcaag
gcccggggcggcaactacaccgccttcaaccacaacatgaaatacctcgagcgtgccgac
gtgcccgaggagatgctcgagccgcttttaaacggcaaggagatcatggattttaccggg
ctcaatccgggaccggcggtggggattatccgccaagccctgctccaggcccaggtggcc
ggagacgtgacctctattcccgaggcagtggagttcatccggacgtattacgaaaaagaa
atccgcaattaa
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