Desulfohalobium retbaense: Dret_0028
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Entry
Dret_0028 CDS
T00989
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
drt
Desulfohalobium retbaense
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
drt02000
]
Dret_0028
Transporters [BR:
drt02000
]
Other transporters
Pores ion channels [TC:
1
]
Dret_0028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ACV67330
UniProt:
C8WZ55
LinkDB
All DBs
Position
30016..31941
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AA seq
641 aa
AA seq
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MRSVLAAALCVAVVCVGTSVGAQNATQLSEIVVTATAAPATEQDVPVSTQIVDREAIERS
GARDLEGLLQREMAADFEIQPGGYSSFGIRGFESYESLGAGFDSGVLVLLDGTRIATGTL
SLIPLDLVQRVEIVHGPGSALYGGSAMGGVVNVITRTGGQETAGQVGVGYGSWEEKTAHV
GVSGCSSEETFGYVLAGSKRTRDDYAIGGGKTYPNTAIDMQSWGGKLTAGPGQQHQLHGV
YLESRNNDLGSPGPLDDNVAENYIDDTLRHLLVTYQGESTDGKQSWRLQPFHSEHEYAFY
SNDMSKYITQMAGVRGQYNHQTARLGTLSLGAEYTQIQDERSGSLVYEPNSEYDVTAVFA
EHRFGSGPWDLWVGARYDHYRARIEKTSELKNVETGTETYDALTWRVGGKYWLTANLGLH
AAVGTAFRPPMAKELTGKFTSYGTTYIGNPNLKSEHSVTYETGMEWGGQHGRIEGTVFHT
KYTDKIEGPSFGETGKYVNIDGWTVQGLELQGQTAFDWSEMLIVRPHATARYYTKREQED
SGGSSQTIFQLPEYEGQIGLAVDLGAKLSLDSWLEIRGPWEGKNVGRQTEFAVFGSRISY
RPVVDLQVYLDVENLFDKRYSYKNGYPMPGRSVAAGIEYTF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcgctctgttctagcagcggcactttgtgtcgcagtagtgtgtgtggggacgtcagtg
ggggcgcagaacgccacccagctctcggaaatcgtggtcacggccacggcggcgccagcg
accgagcaggatgtgccggtgagcacgcaaattgtggaccgcgaggccattgagcgctcc
ggggcccgggatctggaggggttgcttcagcgggagatggccgctgatttcgagattcag
cccggtggctattcctcctttggaatacgtggatttgaatcctatgaatccttgggcgct
ggcttcgactctggggtgttggtcctgcttgatggaactcgtattgctaccgggacattg
agcctcattccgctggatctggtccagcgggtagagatcgtccacgggccggggtcggcc
ctgtacggcggttcggccatgggtggggtggttaacgtgatcacccgcaccggcgggcag
gaaaccgccggccaggtgggcgtggggtacggcagttgggaggaaaaaaccgcccacgtg
ggcgtgagcgggtgcagttcggaggaaaccttcggttatgtcctggccgggtccaagcgc
actcgggacgactacgccatcggtgggggcaagacgtacccgaacacggccattgatatg
cagagttggggcgggaagctcaccgccgggcccggccaacagcaccaactgcacggcgtg
tatctcgaaagtcggaacaatgacctgggcagcccagggcctctagatgacaatgttgca
gagaattatatcgacgacaccctccggcatctgctggttacctatcagggcgaaagcaca
gacggaaaacagagctggcgcttgcagccgtttcactctgagcacgagtatgcgttttat
tcaaatgacatgtccaaatatataacccagatggccggggtgcggggtcagtacaaccac
cagaccgcccgcctcggcaccctgagcctgggtgcggaatacacgcagatccaggacgag
cgttccggctcgttggtatatgagcccaacagcgaatacgacgtgaccgccgtctttgct
gagcaccgtttcggcagcgggccctgggacctctgggtgggggcgcgctacgaccactac
cgggcgcgcatcgaaaaaacctcggaactgaagaacgtggaaaccgggacggaaacctac
gacgcgcttacctggcgcgtggggggcaagtattggctgaccgcgaacctcgggcttcac
gccgctgtgggcactgccttccggcccccgatggccaaggagttaacagggaaatttacc
tcttatggtactacatatataggtaaccctaacctcaagtcggaacattctgtaacctac
gaaacaggtatggaatggggcggccaacatggccgcattgaaggcaccgttttccatacg
aaatacacagataaaatagaaggaccaagttttggtgagactggaaaatatgtaaacatc
gacggctggactgtgcaggggctggaactgcaagggcaaaccgcattcgattggagcgag
atgctcattgtccgcccccatgccacggcccggtactatacgaaacgggagcaggaggat
tccggtggatccagtcagactattttccagcttcctgaatatgagggtcagattggacta
gctgtggatcttggggccaaactctctttggattcctggttggaaatccgggggccatgg
gaaggaaaaaatgtggggcgacaaacggaatttgctgtgttcggatcccggataagctac
agacctgttgttgatttgcaggtctatctggatgtggagaacctctttgacaagcgttat
agttacaaaaacggctaccccatgcccgggcgttcggtcgcggccgggatcgaatatacg
ttctag
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