Desulfohalobium retbaense: Dret_0128
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Entry
Dret_0128 CDS
T00989
Name
(GenBank) Substrate-binding region of ABC-type glycine betaine transport system
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
drt
Desulfohalobium retbaense
Pathway
drt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dret_0128
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
drt02000
]
Dret_0128
Transporters [BR:
drt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
Dret_0128
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
ACV67430
UniProt:
C8WZF5
LinkDB
All DBs
Position
complement(167972..168925)
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AA seq
317 aa
AA seq
DB search
MSGFSKKVLVALIAFAVLTMSASQVLAAKEVRFASVSWTGVTTKTELAVRILRSLGYEAS
NTMVSVPIAFKALDTGEADIFLGNWMPTQATMANKYFDKGTIEPLVASMPGAKYTLAVPT
YAYEGGLQHFKDIAKYADKLGNKIYGIEEGNDGNQIIQSMIDKDMFGLGDFQLIPSSEAG
MLSQVQSFTKDERWIVFLGWAPHHMNEMIDMKYLDGSTSETFGKNDGTATVYTIVRDGFV
EENKNVAKFLKNLIFPISMMNQIMTTLHEKDGLKPVDAGLDWVKAHPEVYKGWLEGVTTI
SGEPALPAFEQYLETVN
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtttttccaagaaagttcttgttgcattgatcgcttttgccgttctcaccatg
agcgcttcacaggtcctggcggccaaagaagtgcgcttcgccagcgtcagctggaccggc
gtgaccaccaagaccgaactggctgtgcgcatcctgcgcagcctgggctacgaggcctcg
aacaccatggtttccgtgcccattgccttcaaggccctggacaccggggaggccgatatt
tttctcggcaactggatgcccacccaggccacaatggccaacaaatacttcgacaagggc
accatcgaaccgctcgtggccagtatgcccggagcgaaatacaccctggccgtgcccaca
tacgcctatgaaggcggcttgcagcacttcaaagacatcgccaaatacgccgataagctg
gggaataaaatctacggcatcgaggaaggcaacgacggcaaccagatcatccaatccatg
atcgacaaggacatgtttggactgggcgatttccagctcatcccttccagtgaggccggg
atgctctcccaggtgcagtccttcaccaaggacgaacgctggatcgtctttctgggctgg
gccccgcaccacatgaacgaaatgatcgacatgaagtatttggacggaagtacatcagag
accttcggcaagaacgacggtacggccacggtctacaccatcgtgcgcgacgggtttgtc
gaagaaaacaaaaatgtcgccaagtttttgaaaaacctcatcttccccatctccatgatg
aaccagatcatgaccaccctccacgaaaaggacgggttgaaacccgtggatgccggcctg
gattgggtcaaggcccatccagaggtctacaagggatggctggaaggcgtgaccaccatt
tccggggaaccggctctgccggcctttgaacaatacctggaaaccgtcaactaa
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