Desulfohalobium retbaense: Dret_0419
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Entry
Dret_0419 CDS
T00989
Name
(GenBank) Formate dehydrogenase
KO
K00125
formate dehydrogenase (coenzyme F420) beta subunit [EC:
1.17.98.3
1.8.98.6
]
Organism
drt
Desulfohalobium retbaense
Pathway
drt00680
Methane metabolism
drt01100
Metabolic pathways
drt01120
Microbial metabolism in diverse environments
drt01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Dret_0419
Enzymes [BR:
drt01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.98 With other, known, physiological acceptors
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
Dret_0419
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.3 formate dehydrogenase (coenzyme F420)
Dret_0419
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Gene cluster
GFIT
Motif
Pfam:
Fer4_8
FrhB_FdhB_C
Fer4_17
Fer4_10
Fer4_22
Fer4
Fer4_2
Fer4_9
Fer4_7
Fer4_6
Fer4_3
Fer4_4
Fer4_21
FrhB_FdhB_N
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
ACV67716
UniProt:
C8X091
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Position
complement(513846..514994)
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AA seq
382 aa
AA seq
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MATTARIDVKDQGPLGAIRELGHHMLESGDIQALLVAKRLPRQGSVMPALISDPAELEEA
DPLSPAFPLNAAKLVSRLTKGETRGRIGAILRPCEIRAFVELVKLNQGSMEDVLLLSLDC
FGALPNNEYSALVRQEGTAALTERYLKAVQEGHETVTATFPLAPACAICEHPVAEAADLH
IGLAGVDLSKHLLLQANTARGEGLLTRLGYQDCPEPPAHRQALEGLRSSKKTARDACFAA
TQEATTDLDKLSEYLAGCVNCYNCRVACPVCYCKECVFVTDVFDHRPTQYLGWANRQGSL
KLPTDTVFFHLTRLAHMSLSCVGCGQCSNACPNNIPVMELFRTVAQNTQNAFGYVPGRNP
DEPIPLSVFSEEEFEEVVDHLA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggccacaacagcacgaatcgacgtcaaggaccagggaccgctgggggccatacgggaa
ctgggacaccatatgctcgaaagcggtgacatccaggccctgctcgtggccaagcgcttg
ccgcgccagggcagtgtcatgcccgccctgatcagcgaccccgccgaactcgaagaggcc
gaccccctctctccggcctttccgctcaacgcggccaagctcgtctcccgcctgaccaaa
ggggaaacccggggacgtatcggggccatcctccggccgtgcgagatccgggccttcgtg
gagctggtcaaactcaaccagggcagcatggaggatgtactgctgctgagtctggattgt
ttcggggccttgccgaacaacgaatacagcgccctggtccgccaggagggcaccgcagcg
ctcaccgagcgttacctcaaagcggtccaggaagggcacgagaccgtcactgcaaccttc
cctctcgctccagcctgcgcgatctgcgaacaccctgtggccgaagcggcggacctgcac
atcggcctggccggcgtggatctctccaagcacctgttgctccaggccaacaccgcccgc
ggcgaggggttgctgacccggctcggctatcaggactgcccggagcccccggcccaccgg
caggccctggaagggttgcgcagcagcaaaaagaccgcccgcgacgcctgttttgccgcc
acccaggaggccaccaccgacctggacaaactctcagagtacctggccggctgcgtcaac
tgctacaattgccgcgtggcctgtccggtctgctattgcaaggaatgcgtcttcgtcacc
gacgttttcgaccaccggccgacgcagtatctgggctgggccaaccggcaggggagcctg
aaactgcccacggacacggttttttttcacctgacccgtttggcgcacatgtccctgtcc
tgcgtgggctgcggccaatgctcgaacgcctgtcccaacaacatcccggtcatggaactt
ttccgcacggtggcccagaacacgcagaacgccttcggatacgtcccgggccgcaacccc
gatgaaccgataccgctgtctgtcttcagcgaagaggaattcgaagaagtcgtcgaccac
ctggcctga
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