Desulfohalobium retbaense: Dret_0491
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Entry
Dret_0491 CDS
T00989
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
drt
Desulfohalobium retbaense
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
drt03016
]
Dret_0491
Enzymes [BR:
drt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dret_0491
Transfer RNA biogenesis [BR:
drt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dret_0491
Prokaryotic type
Dret_0491
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ACV67788
UniProt:
C8X0G3
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All DBs
Position
complement(597468..598439)
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AA seq
323 aa
AA seq
DB search
MAKKKPAFPQQHGLLILNKPQGPTSYGCLDQIKRHLGQRKIGHAGTLDPMASGVLVVLLG
QATKLASYISGGDKIYRGHLRIGLATDTYDIEGAVEHQFPWEHITPEDVGKTVAEWRDLL
EQEVPAYSAAKHKGKPLYELKRTGQEVPVKTKPVEIFDAQVLDIALPDVQFRVSCSQGTY
VRSLAHSLGKRLGCGATLTALVREFSHPFALEQAYSLEEVLGEPDSLAEKILPLDKCLPH
WPSLPLDGSQAREVQNGTRLLVRDVTADFAVHPGDRAQFVDATGRLLALVEAKWEGPVLV
WTILRGFQPPKKHDVAPERTNHE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaagaaaccggcctttccccagcaacacggcttgctcattctgaacaaaccc
cagggaccgacctcctacggctgtctggaccagatcaaacgccatctcggacagcgcaag
atcggccacgctgggactctcgaccccatggccagcggggtcctggttgtattgctcggg
caagccaccaaactcgcctcctatatcagcggcggggacaaaatataccgcggtcacctg
cgtatcggcctggcaaccgatacgtacgacatcgaaggggccgtggaacaccaatttccc
tgggaacacataacacctgaggatgtaggcaagacggtcgccgaatggcgcgatctcctg
gaacaggaggtcccagcgtattcggcggccaaacacaagggcaaaccactgtacgaactc
aagcgtaccgggcaggaagtgccggtgaagaccaagccggtggagatctttgacgcccag
gtccttgacattgccctgccggatgtccaatttcgggtctcgtgttcccaaggaacgtac
gtgcgctccctggcccacagcctggggaagcgacttggctgcggcgcgacgcttaccgcc
ctggtccgggaattcagccatccgttcgctctcgaacaggcctattcgctagaagaggtc
ctcggcgaaccggactctctggctgagaagatcctgcctctggacaaatgcctgccgcac
tggccctcgttgcctctggacggaagccaagcccgggaagtccaaaatgggactcgtttg
ctcgtccgggacgtgacagccgattttgctgtccacccgggggaccgggcccagtttgtt
gacgccacagggcgtttattggcgcttgtcgaggccaaatgggaaggaccagtactggtc
tggacaatcctgcgcgggttccagccgcccaaaaaacatgacgtcgcgcccgaacgaaca
aaccacgagtag
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