Desulfohalobium retbaense: Dret_0497
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Entry
Dret_0497 CDS
T00989
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
drt
Desulfohalobium retbaense
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
drt03021
]
Dret_0497
03009 Ribosome biogenesis [BR:
drt03009
]
Dret_0497
Transcription machinery [BR:
drt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Dret_0497
Ribosome biogenesis [BR:
drt03009
]
Prokaryotic type
rRNA transcription factors
Dret_0497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_1
KH_2
KH_NusA_C
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACV67794
UniProt:
C8X0G9
LinkDB
All DBs
Position
complement(603188..604510)
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AA seq
440 aa
AA seq
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MSMELKKAIDQISKDRGIDRDLLIDTLEEAVRSSVNKKFKNKLDIEVSFDEEAGDIEVYQ
FKVVVEEVDDPNTEISLDEARIEDPNVQLEDELGFRMEISDLGRIAAQSAKQVIIQRMRD
AEQEIIYEEYKDRRGEIISGIIQRRDRAGWIINLGRTEAILPKQEQIPRERFRRGDRVQG
YIIDVRKEGRGPQIVVSRSHPDYMAALFKREVPEVGDGTVTIMGVARDPGKRAKVAVLSQ
DSDVDPVGACVGVRGSRIQNIVQEFKGERIDIVVWNHDVATYAMNALSPAKISRMTVDDV
EKTLEVVVPDDQLTLAIGRKGQNVKLASKLLGWKIDIITESRYGADPSDQADLEQAEHVT
GIPTDHFVQAGLGSLDALREASDEQLAAVDGMDTSKMADLRAALNLLAPNRDTREDDGIQ
ASTADAPSHDTVVAPDDSTE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggaattaaaaaaagctattgatcagatcagcaaggaccggggcatcgatcgc
gatttgctcatcgacaccctggaagaagcggtccggtcctctgtaaataaaaaattcaaa
aacaaattggacatcgaagtctcgtttgatgaagaggctggggacatcgaagtctatcaa
ttcaaggttgttgtcgaggaagttgacgacccgaataccgagatttcgctggacgaagcc
cgcatcgaagatcccaatgtccagttggaagacgaactcggcttccgcatggaaatttcc
gacttggggcgtatcgccgcccaatcggccaagcaggttatcatccagcgcatgcgcgac
gccgagcaggaaatcatctacgaggaatacaaggaccgccgcggagagatcatcagcggc
atcatccagcgccgcgaccgggcgggatggatcatcaacctcgggcgcaccgaggccatc
ctccccaagcaggaacagatcccgcgcgaacggttccggcgtggcgaccgggtccaaggg
tatatcatcgatgtccgcaaggaaggccgtggtcctcagatcgtggtctcccgctcccac
cccgactacatggcggcgttgttcaaacgcgaagtgccggaggtcggcgacgggaccgtg
accatcatgggcgtcgcccgcgatccgggcaagcgggccaaagtggctgtgctttctcag
gattccgatgtcgaccccgtgggcgcctgcgtcggtgtccggggatcccggattcagaac
atcgttcaggaattcaagggagaacggatcgatatcgtggtctggaaccacgatgtggcc
acctacgccatgaacgccctttccccggcaaaaatttcccggatgaccgtcgacgatgtc
gaaaaaaccctggaagtcgtcgtgccagacgaccaattgaccttggccattggccgcaag
gggcagaacgtcaagctggcttccaaacttctggggtggaagatcgatatcatcacggaa
agccgctacggggcggacccgagcgatcaggccgatctcgaacaggcagaacatgtgacc
gggattccgacggaccattttgtacaggcgggcctgggcagcttggacgccttacgcgag
gccagcgacgagcaattggcggccgtagacggcatggacacgtccaaaatggctgacttg
cgggccgcgctgaatctgctggccccgaatcgggacacgcgtgaggacgacggaatccag
gcctccactgccgacgcgcccagccacgatactgttgtggccccggacgacagcaccgaa
taa
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