KEGG   Desulfohalobium retbaense: Dret_0548
Entry
Dret_0548         CDS       T00989                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
drt  Desulfohalobium retbaense
Pathway
drt02020  Two-component system
Brite
KEGG Orthology (KO) [BR:drt00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Dret_0548
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:drt02022]
    Dret_0548
Two-component system [BR:drt02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   Dret_0548
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase AAA_3 AAA_2 AAA_16 MCM bpMoxR ATPase Zw10_N FleQ
Other DBs
NCBI-ProteinID: ACV67845
UniProt: C8WYS9
LinkDB
Position
659170..660528
AA seq 452 aa
MQARILVVDDELDIRVSLSGILEDEGHTVMEADSGEAGLTAMAGKEIDLVFLDIWLPGMD
GLAVLERLRQEWPDIPVIMISGHGTIETAVSAIKNGAHDFIEKPLSLEKVVITANKALEF
SKLKRENRDLRSRVKTDVVQEISGSSGAIASLRAQIDRVAPTDAWVLISGENGTGKEIVA
RSLHVKSRRAKRPMIAVNCAAIPEELIESELFGHEKGAFTGAEQAQRGKFELAHKGTLFL
DEIGDMSLKTQAKVLRILQEQSFERVGGRKTLNVDVRVIAATNKDLPQEIQAGRFREDLY
YRLKVFPLEVPPLRLRMQDVPDLLQEFVALLSREHGFKPLSFTPEALRRLQSYSWPGNVR
ELKNFVERMLIMYAGDEVGPEHLPGDVEAPMAGGHERGVGWDDDFKNARARFEKDFLTQK
LEQCGGNVAQTAEQVGLERSYLYRKLKGYGLI
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcaagcacgtatcctggtcgttgatgacgaactcgatatccgcgtctctttgtccgga
attcttgaagatgaagggcacaccgtcatggaggccgacagcggcgaagccgggctgaca
gcgatggccgggaaggaaatcgatcttgtttttttggatatctggctgccgggcatggat
gggttggctgtactggaacgtttgcgccaggagtggccagatattcccgtgatcatgatt
tccgggcacggcacgattgagactgcggtcagcgcgatcaaaaacggggcccacgacttc
atcgaaaaaccgctttctttggaaaaagtggtcatcacagccaacaaggccctggaattc
agcaaactcaaacgggaaaatcgggatctgcgttcacgggtaaaaaccgatgtcgtccaa
gagatcagcggtagcagtggggccatcgcctccttgcgcgcccagatcgatcgggtggcg
cccaccgatgcctgggtgctcatcagcggcgagaacggaaccggcaaagaaatcgtggcc
cgctcgctgcatgttaaaagccggcgggccaagcgcccgatgatcgccgtgaactgtgcg
gccatccccgaagaactcatagaaagcgaactctttggacatgaaaaaggggcgttcacg
ggcgcggaacaggctcagcggggcaagtttgagttggcccacaagggaacgctgttcctg
gacgagataggcgacatgagcctgaagacccaggccaaagtcctcagaatcctccaagag
caatcctttgaacgggtcggagggcgaaagaccctcaatgtcgatgtccgggtcattgcc
gcgacaaacaaggatttgcctcaggagatccaggctggccggttccgcgaggatctgtac
taccggctcaaagtttttcccctggaagttccgcctttgcgactgcgtatgcaggatgtc
ccggatctgttgcaggagtttgtagcgcttttgagccgggagcacggcttcaaaccgctc
tcgttcaccccggaggccctgcgacggttacagtcctatagctggccgggcaatgtccgg
gaactcaagaattttgtggaacgcatgctgattatgtacgccggagacgaggttggtccg
gagcaccttcccggcgatgtggaagcgccaatggccggtggacatgaacgaggtgtcggc
tgggacgatgatttcaagaatgcccgggcccgttttgaaaaggattttttgacccagaag
ctcgaacaatgcgggggcaacgtggcccagaccgccgagcaggtcggcctggagcggagc
tatttgtatcgcaaactcaaaggctacgggctgatctga

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