Desulfohalobium retbaense: Dret_0563
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Entry
Dret_0563 CDS
T00989
Name
(GenBank) type 1 secretion C-terminal target domain protein
KO
K20276
large repetitive protein
Organism
drt
Desulfohalobium retbaense
Pathway
drt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dret_0563
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
DNA_ligase_aden
HemolysinCabind
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
ACV67860
UniProt:
C8WYU4
LinkDB
All DBs
Position
complement(677567..682687)
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AA seq
1706 aa
AA seq
DB search
MAENTMNVAQMEGQIEEGGRETSNAAAENLQTSQQTQQPIPVPEAGETRVVQVAPGDVIQ
LGADVTEAELIQQGGSVLLRFSDGGDLLLEDFINQTDAGEPPTLILADGSEVTADQIIAA
MTPAPDAAPAAGEGPTSGGAGEYREDVGNLIEGVNRLDGLGPDALAADAALVPEAEGEGI
LPEVEEDALPLAADDAFTIEEDPESPLEGDLSLNDDPGDAPATFAILDGPENGTATVNPD
GTFSYTPSDNYNGPDSFTYTITDSDGDTDTATVTIEVTPVNDAPQALDNEYSTDEDSSVG
GNVITDTGFDDELNVTGVDSDPENDPLTVTAVNGTAIESGDTITLASGALLTMNSDGTFT
YNPNGQFEGLGGEGSENSAGSDTFTYTITDGDATSTADVTINVSGLNDAPQALDNQYSTN
EDSSVGGNVITDTGFDDELNTTGVDSDPENDPLTVTAVNGTAINSGDTITLASGALLTMN
SDGTFTYDPNGQFEGLGGEGSENSSGSDTFTYTITDGDATSTADVTINVSGVNDAPQALD
NEYNTNEDSSVGGNVITDSGFDDELNVTGVDSDPENDPLTVTAVNGTAIESGDTITLASG
ALLTMNSDGTFTYDPNGQFEGLGGEGSENSSGSDTFTYTITDGDATSTADVTINVSGVND
GPQALDNQYSTDEDSSVDGNVITDIGVDDELNTTGVDSDPENDPLTVTAVNGTAIESGDT
ITLASGALLTMNSDGTFTYNPNGQFEGLGGEGSENSSGSDTFTYTITDGDATSTADVTIN
VSGVNDAPQALDNEYSTDEDSSVGGNVITDTGFDDELNVTGVDSDPENDPLTVTAVNGTA
IESGDTITLASGALLTMNSDGTFTYDPNGQFEGLGGEGSENSAGSDTFTYTITDGNATST
ADVTINVSGVNDPPIAVDDVPCPESEDFTASLFLNEGQNGSSASNWSMTNLSIIAYEFNG
DNESDTLAYTQQGVGVLSDGENNPPNRFNELDYNRGEDKSESLQIKFDGFVNTSTVTLGM
FFENEGPNNGEEIGHWQALLNGHVIAESDFDSTNDSSGTKSITIDTGDKLYNELIFTAKE
YSEGGGNLGVNSDSSDYYIKSIYSSGPCDCNGPLATTEDAPTSSLTTHILSNDSDPENNT
LFITNIDTNLTNGKVSFDVDTEGNITNVVYDPDNYYNYLNPGETATDTFSYTISDGYGGT
DTAQVTIKIIGINDYPSAENDMQSLNYGHLLATNNTGATILSSVNLDPDAETTYTAINED
IGIKPDEMAYDGSGLLWAFDNSSKNFYTINPSNGDIKFQYEGVIQSDVDGISFLTINGSE
YMFVLAGKDLYTLNPDNGNTIIPESYSIEGASSNLADLVSLNGKLYTYASNNNLFEISLN
PDGSVDSVNTFSLPSTISRVDGMVGGDDGSLYLVSSKGQSGGTVTPLTIDNDGNITIESP
FDIDGAPLGNLWAMAGMINFNTEVNGNVLDNDTDPENSLLEVTLVDGQSANVGTTVDGDF
GSLTLNSDGTYTYTLDTDITAAGQDSFTYTISDGYGGLSSATLTFNVNGFIPTGSGSVIT
GDENDNILTGTVNNDILFGDEGNDSLTGDDGADTFVYSADGGEGQDTILDFNPGEDIIRL
TDVLDSDTDGLPDLNELAGSAQEVSVAVNGSDVTLTIAGTNGNMDSTVTLDGINSGAYDS
YDGGTLQDLIDNDLIKVQYESGSFDS
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaacacaatgaacgtagcgcaaatggaagggcagatcgaggaaggggggcgc
gagacatcgaacgccgcggccgagaatcttcagacctcgcaacaaacgcaacaaccgatc
cccgtccctgaagcgggagaaacccgtgttgttcaggtcgccccaggtgatgttatccaa
ctcggtgctgatgtcaccgaagctgaactcattcagcaggggggaagtgtcctcctccgt
ttttcagatggaggagacctgcttttggaagattttatcaatcagacagacgcgggcgaa
ccacccacgttgattcttgctgacggctctgaggtaaccgccgaccagatcattgctgcc
atgacaccagcacctgatgcggctcctgctgccggagaagggccgaccagcggtggagcg
ggcgaatatagagaagatgttggcaatctcatagaaggcgtaaaccggttggacggcctc
ggaccggatgccttggcagccgatgccgctttggtcccagaggcagaaggagaggggatt
ctccccgaagtggaggaagacgcccttcctctggccgctgatgacgcctttactattgaa
gaggacccggaatctcctttggaaggcgatctgagcctcaacgacgatcctggtgatgcc
ccggcgacatttgccattttggacggccccgaaaacggcacggcgaccgtcaatccggac
gggaccttctcctacactccgagcgacaactataacggtccggattcgttcacctatact
attactgacagcgatggtgatacggatacagccaccgtgaccatcgaggttacaccggtc
aacgacgctccccaggccctggacaacgagtacagcaccgacgaagactccagcgtgggt
ggcaatgtcatcaccgacaccggatttgatgatgagctcaatgtcaccggcgtcgattcc
gatccggaaaacgaccccctcaccgtgaccgcggttaacggcaccgccattgagtctggc
gacaccatcacgctcgccagcggcgccctgttgaccatgaacagcgacgggactttcacc
tacaaccccaacgggcaatttgagggccttggcggcgaaggcagcgagaattccgccggt
tcagacaccttcacctataccattaccgacggcgacgcgacttcgaccgctgacgtgacc
atcaatgtcagcggcctcaacgacgctccccaggccctggataaccagtacagcaccaac
gaagactccagcgtgggtggcaacgtcatcaccgacaccggatttgatgatgagctcaac
accaccggggtcgactccgatccggaaaacgatcccctcactgtgaccgcggtcaatggc
accgccatcaactccggcgacaccattacactcgccagcggcgccctgttgaccatgaac
agtgacgggaccttcacctacgatcccaacgggcaatttgagggccttggcggcgaaggc
agcgagaattcctccggttcagacaccttcacctacaccatcactgacggcgacgcgacc
tcgaccgctgacgtgaccatcaatgtcagcggcgtcaacgacgctccccaggccctggac
aacgagtacaacaccaacgaagactccagcgtaggtggcaatgtcatcaccgactccgga
tttgatgatgagctcaatgtcaccggggtcgactccgatccggaaaacgatcccctcact
gtgaccgcggtcaacggcaccgccattgagtctggcgacaccatcacactcgccagcggc
gccctgttgactatgaacagtgacgggaccttcacctacgatcccaacgggcaatttgag
ggccttggcggcgaaggcagcgagaattcctccggttcagacaccttcacctacaccatc
actgacggcgacgcgacctcgaccgctgacgtgaccatcaatgtcagcggcgtcaacgac
ggtccccaggccctggataaccagtacagcaccgacgaagactccagcgtggacggcaat
gtcatcaccgacatcggagttgatgatgagctcaacaccaccggggtcgattctgatccg
gaaaacgaccccctcactgtgaccgcggtcaacggcaccgccattgagtctggcgacacc
attacactcgccagcggcgccctgttgaccatgaacagtgacgggaccttcacctacaat
cccaacggacagttcgaaggccttggcggtgaaggcagcgagaattcctccggttcagac
accttcacctacaccatcactgacggcgacgcgacctcgaccgctgacgtgaccatcaat
gtcagcggcgtcaacgacgctccccaggccctggacaacgagtacagcaccgacgaagac
tccagcgtaggtggcaatgtcatcaccgacaccggatttgatgatgagctcaatgtcacc
ggcgtcgattccgatccggaaaacgaccccctcaccgtgaccgcggtcaacggcaccgcc
attgagtctggcgacaccatcacgctcgccagcggcgccctgttgaccatgaacagcgac
gggaccttcacctacgatcccaacggacagttcgaaggccttggcggcgaaggcagcgag
aattccgccggttcagacaccttcacctataccattaccgacggcaacgcgacctcgacc
gctgacgtcaccatcaatgtcagcggcgtcaatgatccgcctattgcagtagacgatgta
ccttgtcctgagtcggaagacttcaccgccagcttgtttttaaacgaaggtcaaaacggc
tccagtgcttcaaattggtcaatgacaaatctgtctattattgcctacgaattcaacgga
gataacgagtcggacactttagcatacacccaacaaggagttggtgtcctgagtgatggg
gaaaacaaccctcctaatagattcaatgaactggattataacagaggtgaagacaaatcg
gaatcgctacaaataaaattcgatggctttgtcaacacctcgactgttacattaggcatg
ttttttgaaaatgaaggccccaataatggtgaagaaatagggcattggcaggcattattg
aacggacatgtgattgctgaatctgactttgactccacaaatgactcatctggcacaaaa
tccattactatagacaccggcgacaagctatacaacgagcttattttcacagctaaagaa
tatagtgaaggagggggaaatcttggtgtcaattcagacagctctgattactacattaaa
tccatttattcctccggcccatgtgactgtaatggccccttagccacaaccgaagacgct
ccgacttcatctttaactacacacattctttccaacgactctgatcctgaaaataatacg
ctttttatcactaacatcgataccaatctaacgaacggcaaggtttccttcgatgtcgac
accgaaggaaatataaccaatgtcgtctatgatcctgataattattacaactacttaaat
cctggcgaaactgcaactgacacattttcatacactatcagcgacggatatgggggcact
gacacagcgcaggttacaatcaagatcattggtatcaacgactacccctcagctgaaaac
gatatgcaatctctcaactatggccacctccttgctacaaacaatacaggggctacgata
ctctcctcagtcaatctagaccctgatgcagagacaacatatacagctataaacgaggac
ataggcatcaaacccgatgaaatggcctatgatggatctggattactttgggctttcgac
aattccagcaaaaacttttacaccatcaacccgtctaatggcgatataaaattccaatac
gaaggagtcatacaatctgatgtcgacggcatatctttccttactataaatggctccgag
tatatgtttgttcttgcaggaaaagatctgtacactctcaatcctgacaatggcaacacg
ataattccagaaagctactccatagaaggagcttctagtaatcttgcagacttagtttct
ctcaacggtaaattatacacctatgcttctaataacaatctttttgaaatatcgcttaat
ccagacggaagtgttgattcagtaaacaccttttctttaccgagtactatatccagagtc
gacggaatggttggcggtgacgacggtagcctataccttgtttcctcaaaaggtcagagt
ggtgggacagtgacccctctaaccatagataatgatggaaatatcaccattgaaagtcct
ttcgatatagatggggcgccacttggcaatctctgggccatggctgggatgataaatttc
aacacagaagttaatggaaacgttttagacaacgacaccgatccggaaaactcattgttg
gaagtcactctggtagacggccaaagcgcgaacgtcggtaccactgttgatggtgacttc
ggctcgttgaccctgaacagcgacgggacgtacacctacacactggacacggatataacc
gcagccggccaggacagcttcacgtataccatttctgacggatacggaggactttccagt
gccacgctgaccttcaacgtcaacggttttatcccaactggttccggctcggtaatcacc
ggggacgaaaacgacaacatccttaccggcacagtgaacaatgacatcctgtttggagat
gaaggaaacgacagcctcaccggcgacgatggcgctgacacctttgtctacagtgctgat
ggcggcgagggtcaggacacgatcctcgatttcaatcctggagaggatatcatccgcctg
accgatgtcctggatagcgatacggacggactgccggatctcaatgaactggctggatca
gcgcaagaagtaagtgttgcggtcaatggcagtgatgtcaccctgaccatcgcgggaaca
aatggcaacatggacagcaccgtcaccctggacgggatcaactcgggagcctacgactcg
tacgacggcggaacgctccaggacctcatcgacaacgacctgatcaaggtccaatacgaa
tccggttcttttgacagctaa
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integrated database retrieval system
