Desulfohalobium retbaense: Dret_0806
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Entry
Dret_0806 CDS
T00989
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
drt
Desulfohalobium retbaense
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drt03009
]
Dret_0806
Enzymes [BR:
drt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Dret_0806
Ribosome biogenesis [BR:
drt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Dret_0806
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ACV68097
UniProt:
C8X100
LinkDB
All DBs
Position
complement(954796..955620)
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AA seq
274 aa
AA seq
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MLAGLLYSFARPGHTKAMSTPTSSHAPESCRLNKFLAQAGVCSRRKADTYIAAGRVQVNG
SLVTQLGVQVHPGQDEVRVDGRVVELPEAQSAGHDYILLHKPVQVVTTAKDPQGRRTVLD
LLPSQTFTRRIFPVGRLDFMSEGLLLLTSDGELANRLTHPRWHVEKVYEVTLREAVTEEH
MRQMSSGMRLSEGEQLAPVDVQRRKTAADTSSLELTLHQGVNRQIRRMCRDLGLTILRLK
RIRQGPVRLGKLPQGHWRHLTATEITTLKKRLGL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgttggcgggcctgctttacagcttcgcccggcccgggcacactaaggccatgtcaaca
cctacttcttcccacgcccccgaaagttgccgactgaacaaatttctcgcccaggccggt
gtctgctcaaggcgcaaggcggacacctatatcgccgcgggccgggtccaggtgaatggc
tccctcgtcacccaactcggcgtccaggtccatcccggccaggatgaggtccgcgtcgac
ggccgtgtggtcgagcttcctgaagctcaatcggccgggcacgactatatcctgctgcac
aagccggtgcaggtcgtgaccacggccaaggatccccagggacgccgaaccgttttggat
ctcttgccgtcccagactttcaccagacgcattttccctgttgggcgactggatttcatg
tccgaagggctcttgttgttgacctcggatggagagttggccaatcgcctgacccatccg
cggtggcatgtagaaaaggtctacgaagtcacgcttcgcgaggcggtcaccgaggagcac
atgaggcagatgtcctcaggcatgcgcctgagcgaaggagaacaattggccccggtagat
gtccaaaggcggaaaaccgccgctgacaccagcagccttgaattaaccctgcaccagggg
gtgaaccgccaaatccgccgcatgtgccgcgacttggggctgaccatcctgcggctcaaa
aggatccgccaaggaccggtacgattgggcaagctgccccaagggcattggcgccatctc
acggccactgaaatcactaccctcaaaaagcggctcggactctaa
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