Desulfohalobium retbaense: Dret_1022
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Entry
Dret_1022 CDS
T00989
Name
(GenBank) Protein of unknown function DUF2219
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
drt
Desulfohalobium retbaense
Pathway
drt00540
Lipopolysaccharide biosynthesis
drt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Dret_1022
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
drt01005
]
Dret_1022
Lipopolysaccharide biosynthesis proteins [BR:
drt01005
]
Lipid A
Dret_1022
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Gene cluster
GFIT
Motif
Pfam:
LpxR
Ntox23
Motif
Other DBs
NCBI-ProteinID:
ACV68310
UniProt:
C8X1Y7
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All DBs
Position
complement(1204599..1205660)
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AA seq
353 aa
AA seq
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MTTPAKRPFGFLLPLFLAGLIVFAVIGPVYASSNSSQDWQTVSFFFENDLFADTDKYYTN
AVQLTWVSPDLERYRDDVRLPQWTLPIIRCAPFVNVPDSTHNVGLLLGQHIYTPSDIRTT
IVDPDERPYAGFLYSGLALHSKTTSQLDTLEAVVGIVGPSALGEEAQNTVHRLRGLHLAR
GWDSQLHDEPALRLAWQRKHRLWQWTNPNGFGADCLPHIGATLGNVKTALNAGGEFRLGY
RLPQDFGTDTIRPGAGISAPLPTGPATRWGRLGVHLFAGVNAQVIARNIFLDGNTWRHSR
HVDKRFIVGEISAGVAVTFEQLKITYRHVFRTQEFEHQDRGHAIGSMAVTWAF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcctgcaaaacgtccctttggattcctattgcccctctttttggctggccta
atcgtattcgctgtgattggcccggtatatgcctcctccaattcgtcacaggactggcaa
actgtgagtttcttttttgaaaacgacctctttgccgacacagataaatactacaccaac
gctgtccaattgacatgggtttccccggacctcgaacgctaccgtgacgatgtccgcctg
ccgcaatggaccctgccgatcatccgttgtgctccttttgtgaacgtcccggacagcacc
cacaatgtgggccttcttttggggcagcatatctacaccccttcggatattcgcaccaca
atagtcgaccccgacgagcggccctatgccggctttctctacagtggcttggccctgcac
agcaaaacgacttcgcaattggacaccctcgaagcggtcgtcggcatcgtggggccttcg
gcccttggggaagaggcccaaaacaccgttcacagactccgcggactgcacctcgcccgt
gggtgggacagccaactccacgatgaacccgcccttcgactggcttggcaacgcaaacac
cggctctggcagtggacaaacccgaacgggttcggagcggactgcctccctcatatcgga
gccactttgggcaatgtcaagaccgcgctcaatgcaggcggggagttccggcttggatac
agactcccacaggatttcggcacggataccattcgcccgggcgccgggatcagcgctccc
ctccctacaggcccggccacgaggtggggccggcttggtgttcacctcttcgctggtgtc
aatgctcaggtgatcgcccggaatattttcctggatggcaacacctggcgccatagccgt
cacgtcgacaaacgtttcattgtcggagaaatttccgccggcgtggctgtgaccttcgaa
caactcaaaataacctaccgccatgtctttcggacccaggaattcgaacaccaggaccgc
ggccatgccatcggctcgatggccgtcacctgggccttttaa
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