Desulfohalobium retbaense: Dret_1055
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Entry
Dret_1055 CDS
T00989
Name
(GenBank) choline/carnitine/betaine transporter
KO
K02168
choline/glycine/proline betaine transport protein
Organism
drt
Desulfohalobium retbaense
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
drt02000
]
Dret_1055
Transporters [BR:
drt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Dret_1055
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Ortholog
Paralog
GFIT
Motif
Pfam:
BCCT
Motif
Other DBs
NCBI-ProteinID:
ACV68343
UniProt:
C8X220
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All DBs
Position
1246362..1247924
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AA seq
520 aa
AA seq
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MSEDLRTTSRRTTATWQNLENKILKYDIHPWVFFGGGAVIILGVALTLIAGETASTLFSS
VQTWIATYTGFFFVLVMNVVLVFCFFLLFTKMASMRIGGEDAEPEFSTMGWFAMLFSAGM
GIGILFYGVAEPMFHYVANPLSEPGSPEAARMAMELTFLHWGLHPWGIYALVGLGLAFFG
FSEGLPLSIRNIFYPLLGDKIYGPIGNLIDVLATVATLYGVATSLGLGVQQVNAGLAHLF
GIPQNPWVQCGLIALITAIATWSVVRGLDAGIKFLSELNMAAAGLLMLFVLLLGPTQFIL
NGILENIGNYIQDFAHLATWNETYTNGEWQNGWTVFYWGWWIAWSPFVGMFIARVSYGRT
IREYLLGVLLVPVAVTFVWMTVFGNSALFIEHFGAGGLAKAVQENIPVSLFVFLEHFPLS
MLTSLLAVVVVITFFVTSSDSGSMVIDIITAGGNPDPPTPQRLFWAVLEGVVAAVLLLGG
GLVALQTAAITTGLPFAVVILMMCWAVYRGLHDHWMRYYD
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggatctgcgaacaacgtcacggcgcacgacggcgacgtggcagaatctggaa
aacaagatactgaaatacgatatacatccatgggtgtttttcggcggcggggcggttatc
atcctcggcgtggctttgaccttgattgcaggcgagacggcctcgaccttattcagttcc
gtgcagacctggattgccacatataccggtttctttttcgtgctggtcatgaacgtggtc
ctggtcttctgctttttcctcttattcaccaaaatggcgtcgatgcgcatcggcggagag
gacgctgagccggaattctccaccatggggtggttcgccatgctttttagtgctggaatg
ggtatcgggatccttttctacggggtggccgaacccatgttccactatgtggccaatccc
ctctcagaacccggttctcctgaagcggcgcgcatggccatggaattgaccttcctgcat
tggggcctgcacccttggggtatttatgcccttgtcggcctcggcctcgccttcttcggc
ttttccgaaggactaccgctttccatccgtaatattttctatcccctgcttggcgacaaa
atttacggccccatcggtaatttgatcgatgtcttggccacggtggcaacgctgtatggg
gtggcgacttccctggggctcggggtccaacaggtcaatgccggactggcccatttgttt
ggcattccgcaaaatccctgggttcaatgcggcttgattgccttgatcaccgccattgcg
acctggtccgtcgttcgcggcctggacgcgggcatcaaatttttgagtgaattgaacatg
gccgccgccgggttgctgatgctctttgtcctcttgttggggccgacccaatttatcctt
aacggtattttggagaatattgggaattatattcaggattttgcgcatcttgccacctgg
aacgagacctacaccaacggcgaatggcaaaacggctggacggttttttactggggctgg
tggatcgcctggtctccgtttgtgggcatgttcatcgcccgggtttcctatggccggacc
atccgggaatacctgctcggcgttctgcttgttcccgtcgctgtgacctttgtctggatg
accgtgttcggcaacagtgctttgttcatcgagcatttcggggctgggggactggccaag
gcggtacaggagaacattcctgtctccttgtttgtctttttggaacattttcccttgtct
atgctgacctcccttttggcagtcgttgtcgtcatcacgttttttgtgacctcctctgac
tccgggtccatggtcattgacatcatcaccgccggaggtaacccggatccgccgactccg
cagcgcctgttctgggccgttttggaaggcgttgtcgctgcggtcctgttgctcggcggc
ggcctggtcgccctgcagacagccgccatcacaaccgggttgccgtttgcggtggtcata
ttgatgatgtgctgggccgtgtatcgcggtctgcatgaccattggatgcgctactacgac
taa
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