Desulfohalobium retbaense: Dret_1337
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Entry
Dret_1337 CDS
T00989
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
drt
Desulfohalobium retbaense
Pathway
drt00300
Lysine biosynthesis
drt00470
D-Amino acid metabolism
drt01100
Metabolic pathways
drt01110
Biosynthesis of secondary metabolites
drt01120
Microbial metabolism in diverse environments
drt01230
Biosynthesis of amino acids
Module
drt_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dret_1337
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dret_1337
Enzymes [BR:
drt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Dret_1337
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACV68625
UniProt:
C8X2H8
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All DBs
Position
complement(1562941..1564197)
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AA seq
418 aa
AA seq
DB search
MHHFVYKDGRLQAEEFDVAELAATYGTPLYIYSTATLRRHYHAFDSAFEGLDHLTCFSAK
ANSNLSVLRLLGDMGAGVDIVSGGELYRALKAGIAPEKIVYSGVGKQRHEIEQALEADIL
MFNCESVPELELINEVAQEKGLVARISLRINPDVDPQTHPYISTGLKKNKFGLNLEQSEE
AYRLARDLPGVDPIGMDCHIGSQLTSIEPFLEALERLKRFYAKLQDMGLAIRYLDLGGGL
GITYDEETPPHPQQLGEALAESLKDLDVTLILEPGRVIAGNAGIMVSKVLYTKTSEAKHF
TVVDAAMNDLVRPSLYGAYHRLAEVTPQKRQELPMDIVGPICETGDFLAQDRTLPELAPG
ECIAAFSAGAYGFTMASQYNSRPRAAEILVDGDQARIVRRRETYEDLIALETDALTGK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcaccattttgtatacaaagacggccgcttgcaggctgaagagttcgatgtggccgag
ttggccgccacctacggcacccccttgtatatctactctacggccactttgcgccgccat
taccacgcctttgattccgccttcgaggggttggaccatttgacctgcttctcagccaag
gccaattccaacctcagtgtcctgcgcctgctgggcgacatgggcgccggggtggatatc
gtctctggcggagaattgtaccgggcattgaaggccgggatcgccccggagaaaatcgtc
tattccggggtcggcaaacagcgccatgaaatcgaacaggccctggaagccgatattttg
atgttcaattgcgaatctgtcccggaattggaactcatcaacgaggtggcccaggagaag
gggctggtggcccggatcagtctgcgcatcaacccggatgtggacccccaaacccatccc
tacatttccaccggtcttaagaagaacaaattcggcctcaacctcgagcaatccgaagag
gcttatcgcttggcccgggatctgcctggcgtggaccccatcggtatggattgtcatatc
ggctcgcagctgacgagcatcgagccgtttctggaggccctggagcggctgaagcgtttt
tatgccaagctgcaggacatggggctggccattcgctacctggatctgggcggcggcctg
ggcatcacctacgacgaagagacgccaccacaccctcagcaacttggcgaggccttggcc
gaatctctgaaggacctggatgtgacccttattctcgagcctggtcgggtcattgctggc
aatgccggcatcatggtcagcaaggtcttgtacaccaagacttcggaggccaaacatttt
accgttgttgacgcggccatgaacgatctggtccgcccttctctctacggtgcctaccac
cgtctggccgaagtcactccccagaagcgtcaggaattgccgatggacattgttggtcct
atttgtgaaacaggggattttctggctcaggaccggacacttccggagctggcccccggt
gagtgtatcgccgcattttccgcgggcgcgtatggcttcaccatggcctcacaatacaat
tcgcgcccccgggcggccgagatcctggtcgatggcgatcaggcccggatcgttcgccgc
cgcgaaacctatgaagacttgatcgctttggaaacggacgccttgacgggaaaatga
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