Desulfohalobium retbaense: Dret_1404
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Entry
Dret_1404 CDS
T00989
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
drt
Desulfohalobium retbaense
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drt03019
]
Dret_1404
Messenger RNA biogenesis [BR:
drt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Dret_1404
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
ACV68691
UniProt:
C8X2P4
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Position
1637872..1638903
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AA seq
343 aa
AA seq
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MQSKNLFVSDLQQGSAIEDLFLIAEARSAETRNGQPYWDLVLQDATGKVSAKIWAPLSQQ
ANGLAPGQFLHVQAKVELFREKFQLNITRFEEIDPEGETLDWSAFVPRTAEAPETILEDL
EQLCRDELQHKPWRALCRSVLRDPEIRQRLLQAPAAKSVHHAYRGGLLEHTRQVCRVCLQ
FAALYPDLDKELLFVAALFHDFGKAWELEGLATWDYSDAGQLLGHIHLGLERLEPFLRRQ
KGLDPELALHLKHAILSHHGELEFGSPKRPKTPEAFALHFADNLDSKLTTASAALNDLGE
HDGGWTPKVWALQRQLFKRTPTPAPMATQHRPREDQCSLPLKE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaagaacctgtttgtttccgatctgcaacagggctcggccattgaagatctg
ttccttattgccgaagcccgaagcgcggaaacacgcaacggccagccctattgggatctc
gtcctccaggacgcaaccgggaaggtgtcggccaagatatgggcgccgttgagccaacag
gccaacggcctggctccagggcaatttcttcatgtccaggccaaagtcgaactctttcgc
gaaaaattccagctcaatatcactcggtttgaggaaatcgatcctgaaggggagacattg
gactggtcggcatttgtgccccggacagcagaagcgccggaaaccattttagaggatctg
gaacaactctgcagagacgaattgcagcacaaaccgtggcgcgccctctgccgctccgtg
ctccgggatcctgaaatccggcaacgactcctgcaggcccccgcggccaaatcggtccac
cacgcctatcgcggtggccttctggaacacacccgacaagtctgtcgcgtctgtctgcaa
ttcgccgcgctctatccggatctggacaaggaattgctctttgtcgcggccttgttccat
gatttcggcaaggcctgggaacttgaggggctggcgacatgggattacagtgatgctggc
caactcctggggcatatccatcttgggctcgaacgtctcgagccgtttctgcgccgccaa
aaaggcctggatccggaattggccctgcacctcaagcacgccatcctcagccaccacggg
gagttggagttcgggtcgccgaaacgaccgaaaaccccggaagcctttgccctgcacttt
gcagacaacctcgattccaaattgacaacagcgtccgccgcgctcaatgacctgggcgaa
catgatggggggtggacaccgaaagtctgggcgctccagcggcaactgttcaaacggaca
ccgacaccggctccgatggcgacacaacaccgccccagggaggatcaatgttcattacct
ttgaaggaatag
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