Desulfohalobium retbaense: Dret_1975
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Entry
Dret_1975 CDS
T00989
Name
(GenBank) UvrD/REP helicase
Organism
drt
Desulfohalobium retbaense
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACV69259
UniProt:
C8X4N6
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Position
complement(2263632..2267030)
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AA seq
1132 aa
AA seq
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MDSNLADGKQRSRALDPYTSFIVQAPAGAGKTELLTQRYLVLLAGVSAPEEVLAITFTRK
AATEMRNRIIAALQRAGDPTPPDKPHEALTWRLARAVREQDQLLGWELEQAPSRLKIQTI
DSLCAQLTRQMPVLSSFGAAPGIRDDAREFYREAARNTLAELDNETWSEPLATLLAHLDG
NTDQFEALLVDMLGRRDQWLRHVLQQDARGQGRQILEAGLDRIVSRALAELTVFFGDERG
EELLELLRYAAANLERDGKTLLANCLGVEEFPDPDPAALPFWRDVCDFLLTDSNQWRKSV
TKGLGFPAPSSVGTAQKAQAKDSKERWQSLVADLADEEGLLETLQMVRGLPEGNYSDAQW
TVLQALLAVLKLATAQLLLVFQGAGEVDFIEIGMQARHALGEPQAPTDLALSLDYRIQHI
LMDEFQDTSVTQFELLERLVAGWQPDDGRTFFGVGDPMQSIYRFREAEVGLFLQAARNGI
GDIPLEPLVLSVNFRSQAGVVNWVNAVFPDVMPTQPEAMTGAVPYTPSQTIRAANAEHAV
SVHPRRAANEAAEAEEVAASIQTTLETVPQHERIAVLARAANHLVPIVQRLRRDGIPFQA
VDIDPVIEKPVVSDLLALTRALARPADRLAWLAVLRAPWCGLSAGDLCTVAQECSGPLWP
ALEGAVQEQTVSASGQHRLQRVVGSLRPVLEQREYIAFYKGVEMAWHALGGPACLTDADE
QEAARVFFELLRHLSTGGRTPSPEEVEEGLANLRARPEPDGAARVQLMTIHKAKGLEFET
VIIPGLGRGTPPVDRRLLMWQEVPRDTGGEDLLLAPVPPTGGKPEATYRYIQQLEKTKTR
LEEGRVLYVAVTRARERLHLFGAAKQRADGTLAPVSGSLLELLWPHVKDRFEACQGAAED
QEGVQPEAQQGYWLRRLPANWEVPAVPVRVGGSARGVEGQSRVERPEFDWAGRTVRRIGT
VIHRWLMRVAQETEQHWHERSLARCREAFRRDLVGEGVVGPELSAAVDRVEQALAQILSD
RRGQWLLASHSEARCEYPLTGALDGELHSVVLDRTFVDGQGQRWIVDYKAGRHSGSDLEA
FLDREQERYREQLETYARLVALWEKRPIRLGLYFPLVQGWREWAWKGEGQDT
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaatctcgccgacggtaagcagcgcagcagggcgctggacccatacacatcg
tttatcgtccaggcccctgccggggcggggaaaacggagcttttgacccagcgctacctc
gtcttgctcgctggggtaagcgcaccggaagaggtcctggccattaccttcacccgcaag
gcggccaccgagatgcgcaatcgcatcattgccgccttgcagcgggccggtgatccgacg
ccgccggacaagccccatgaggcgctgacctggcgtctggcgcgggcggttcgcgaacag
gaccagctccttggctgggaactggagcaggccccgtcacgattgaagatccagaccatc
gattcgctgtgcgcgcaactcacccggcagatgccggttttgtcttcatttggcgcggcc
cccggcatccgcgacgacgccagggagttttaccgggaggcggcccgcaacaccctggcc
gagttggacaacgaaacgtggtctgaaccgttggcgactctgctcgcccatctcgacggc
aacaccgaccaattcgaggcgctgctggtggatatgctcggccggcgggaccagtggctg
cggcatgtgctccaacaagacgccaggggacagggccggcagatacttgaagcggggttg
gacaggatcgtcagccgggcgctcgccgagttgaccgttttttttggcgacgagcggggc
gaggaactgctcgaactgctgcggtacgccgccgccaatctcgaacgcgatgggaaaacc
ttgctggcaaattgcctgggagttgaggaatttcccgacccggatccagccgctttgccc
ttttggcgtgacgtctgtgattttctgctcacggatagcaaccagtggcgcaaatcggtc
accaaagggctcgggtttcccgcccccagcagtgttgggacagcgcagaaggcgcaagcc
aaggactccaaggagcggtggcagtctctggttgcggatctcgccgatgaagaggggctt
ttggagaccctgcagatggtccggggactgccggaaggcaactacagcgatgcacaatgg
accgtgctccaggccctgttggcggtcctcaaactcgccacggcccaactcctgctcgtt
ttccagggcgccggggaagtcgattttatcgagatcgggatgcaggcccgccacgccctt
ggcgagccccaggctcccaccgatctggcgttgagtctggactaccgtattcagcatatc
ctcatggacgaattccaggatacctccgtgacccaattcgagcttttggagcggctcgtt
gccggttggcaaccggatgacgggcggacgttttttggggtcggcgatcccatgcagtcc
atttaccgcttccgcgaggccgaagtcgggctgtttttgcaggccgcccgcaacggcatc
ggcgatatccctttggaaccgctggttctctcggtcaacttccgttcccaggccggggtg
gtcaactgggtcaacgcggtcttcccggacgtgatgccgacccagccggaggcgatgacc
ggtgcggtgccgtacaccccgtcgcagaccatacgggcagcgaacgcggagcacgccgtg
tccgtgcacccccgccgcgcggcaaatgaagcggccgaggcggaggaggtggcggcctct
atccagacaaccctggagacggtgccccagcatgagcgcatagctgtgctggcccgggcg
gcaaatcatctggtcccgattgtccaacgcttgcgccgcgacggcatcccgtttcaggcc
gtggatatcgatcccgtgatcgaaaagccggttgtcagcgatctgctcgccttgacccgg
gccctggcccgcccggcagaccgtctggcctggctcgccgtgctcagggccccgtggtgc
ggtctcagcgcaggggatctctgcacggtggcgcaggagtgttcggggcccttgtggccg
gctctcgaaggggctgttcaggagcagaccgtttcggcctcagggcaacaccgtctgcaa
cgggttgtggggagtctgcgtcctgttttggaacagcgcgaatacatcgccttctacaag
ggggtggagatggcctggcacgcccttggcgggccggcgtgtttgacagatgcggacgag
caggaagccgcgagggtgttttttgaactcctccggcacctctcgacgggcggcagaacc
ccctccccggaggaggtggaggaaggcctcgccaatctgcgggcccgcccggaacccgac
ggggcggcacgggtgcaattgatgaccatccacaaggccaaggggctggaattcgagacg
gtgatcatcccgggacttggtcgcggcacacctccggtggatcggaggctgctcatgtgg
caggaggtgccgcgcgacactggcggtgaggacctgctgctggcaccggttccgcccacc
ggcgggaaacccgaggcgacatacaggtatatccagcaattggagaagaccaagacccgt
cttgaggaagggcgggtgttgtacgtggccgtgacccgggccagggagcggctgcatctt
ttcggagctgccaaacagcgcgccgacgggacgcttgcccccgtgtccggatcacttctg
gaactgctctggcctcatgtgaaggaccgctttgaagcgtgccaaggggcggcggaggac
caggagggcgttcagccggaagcccaacaagggtattggctcagacgattgcccgcaaac
tgggaggtgccggcagttccggtacgcgtggggggcagtgcgcggggagtggagggccag
agccgggttgaacgccctgagttcgattgggccggccggaccgtgcggcggatcggaacc
gtgatccatcggtggctgatgcgggtggcccaggaaacggagcagcattggcacgagcgt
tctctggccaggtgtcgcgaggcgttccggcgcgatctggtcggcgaaggggtcgttggt
cctgagttgagcgcggcggtggatcgggtggagcaggccctggcgcagatcctgtcagac
cggcgcgggcagtggcttcttgcttcccacagtgaggcccgctgcgagtatcccttgacc
ggtgccctggatggagaactccattcagtggtcctggaccgcacctttgtcgatggacag
gggcagcgctggatcgtggattacaaggcggggaggcacagcggctcggacctggaggca
ttcttggatcgtgagcaggagcgctaccgcgagcaactcgaaacctacgcccgcctcgtg
gccttgtgggaaaagcggcccattcgtttggggctctattttccgcttgtccagggatgg
cgggagtgggcctggaaaggggaagggcaagacacctaa
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