Desulfohalobium retbaense: Dret_2122
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Entry
Dret_2122 CDS
T00989
Name
(GenBank) extracellular solute-binding protein family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
drt
Desulfohalobium retbaense
Pathway
drt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dret_2122
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
drt02000
]
Dret_2122
Transporters [BR:
drt02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Dret_2122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ACV69406
UniProt:
C8X4D2
LinkDB
All DBs
Position
2412990..2414219
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AA seq
409 aa
AA seq
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MPLVFRFGLVAGVLGCLLCIAGCQQTASEPDWRTKDFERIIEAARGTTVRWYMYGGWPHV
NEWVDTYVAPAMQERYGISVKRVPMNAPVFVNKLINEKSAGKDPGTIDLVWINGENFKAT
KNAGALWGPFAEQLPNWQRYVDPSTVAQDFGFPTKGYEAPWGRAQFVLIYDAKRTPNPPR
SAESLRRWIQDHPGRFTYPQPPDFTGSAFVRQLFYATTGGHEQYMDGFNATLYARNAPRL
WEYLNGIEPSLWQQGRTYPQSSATLDTLFARGEVDFSMSYHPPHAQNKILDGTFPASVRT
VALANNSIANTHYTAIPFNAPNKPGAMVLANFLLSPTAQLSKYKPENWGDFPAIDLDRLD
QSQRRRFEDVDLGPATLSAETLAEHAVPEIPIGYLEAIEADWKSRVLTN
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgccattggtttttcgttttggcctggttgcaggagtactgggatgcctgttgtgcatt
gccggatgccagcaaacagcatccgaaccggattggcgcacaaaggattttgagcgcatt
atcgaggcggcccgcggcaccacagtgcgctggtacatgtacggtggctggccccatgtc
aatgaatgggtcgatacctatgtcgccccggccatgcaggagcgttacggaatcagtgtc
aaacgcgttcccatgaacgcgcctgtttttgtcaataaattgatcaacgaaaaaagtgcc
ggcaaagaccccggcaccattgatctggtctggatcaacggcgaaaattttaaggccacc
aagaatgcaggggccttgtggggcccctttgctgagcagctcccgaattggcagcggtat
gtcgacccttctaccgtggcccaggacttcggctttcccacaaaggggtatgaagcccct
tggggccgggcccaattcgtcttgatctacgatgccaaacgcacgcccaatccgccgcgc
tcagcagaaagtctgcgccgatggatccaggaccaccctggccgtttcacctatccacaa
ccgccggatttcaccggatcggcctttgtccgtcagctcttctacgccaccacaggtggg
cacgaacagtatatggacggcttcaacgctaccttgtacgctcgaaacgccccccgcctc
tgggagtatctcaacgggatcgagccgtcattatggcaacaaggccggacatacccccaa
agctctgcaactctggacaccttgttcgccagaggcgaagtcgatttcagtatgtcctac
catccgccgcacgcccaaaacaaaatcctggacggcactttccccgccagcgtgcggacg
gtggcattggccaacaattcgattgccaacacccactacacggccattcccttcaatgcc
cccaacaaaccgggggctatggtcctggccaattttctgctctcgcccacggcccagctc
tcgaaatacaagcctgaaaactggggggattttccggccattgatctcgaccgcctggac
cagtcccaacgccgacgcttcgaggatgtcgacctcggtccggccacattgagcgccgag
accctggctgagcacgcggtccctgaaattcccatcggctatctggaagccattgaagcc
gattggaagtcccgagtcctgaccaattga
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