Desulfohalobium retbaense: Dret_2327
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Entry
Dret_2327 CDS
T00989
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
drt
Desulfohalobium retbaense
Brite
KEGG Orthology (KO) [BR:
drt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
drt03000
]
Dret_2327
Transcription factors [BR:
drt03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dret_2327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA
AAA_5
Mg_chelatase
GAF_3
AAA_16
nSTAND3
AAA_7
AAA_19
AAA_22
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ACV69611
UniProt:
C8X5B4
LinkDB
All DBs
Position
2643739..2645307
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AA seq
522 aa
AA seq
DB search
MTNNGHDKATRVTLNPTRRYETLLRINNAIVQQTTRESLFQALSNEIYQLIEYDRFSINL
YDHELRSLSYFASAKGVSLGGKMTRPLEKGLIAQTVIRTKEPLIIPDVKNQSYFSNMNNM
IEAGLNVTMGYPLIVRDTVLGSLHFSFKNRPDNLDEVNSFFEDLSPQVAIAVYNILAHNR
LKRLNESLKNEKKFLKKEAHGSFDPENFFYKSESMSDVMQQVKNVAASDAPVLITGETGT
GKEYIAHCIHHTSLRSDALLVKVNCPALASSLFESELFGHTKGAFTGASQQRIGRFEMAN
NGTIFLDEIAELPMPQQAKILHVLQDRCFERVGESRSISADFRIVAATNKDLLHAIHNES
FRSDLYYRLNTAQIHIPSLRERPEDIPVLVINLSDQISKRLHRPSPKYSDKVLESLCQYP
WPGNVRELKNFVHRMFLQRSAENVKLSDVKSYLGNSQEIEYNDNNILPMHEMEKQHIVNA
LRICKGVLSGENGAASLLQMKRSTLQYRLKRHNINPSDYKAF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataatggtcacgataaagccacccgagtaactcttaatccaacccgtagatac
gaaacactcttgcgaattaacaacgctatagtccagcagacaaccagagagtcacttttt
caggccctttcaaatgagatctaccaactcattgaatacgacagatttagcattaacctc
tatgaccacgaattacgatcgcttagctactttgcttcggctaagggtgtttccctcggc
gggaaaatgacacgccccctcgaaaaaggattgatcgctcaaacagtcattagaaccaaa
gaacctcttattatacctgatgttaaaaaccagtcatatttctcaaacatgaataatatg
attgaagcaggcctcaacgtgaccatgggatatccacttattgtaagagatactgttctt
gggtctcttcatttttcttttaagaataggcccgacaaccttgatgaggttaatagtttt
tttgaagatctctcacctcaagtcgccattgctgtttacaacatactagctcacaacagg
ctaaaaagactaaatgaaagcttaaaaaatgaaaaaaagtttttaaagaaggaggctcat
ggatcttttgatcctgaaaatttcttctacaaatctgaatctatgtcagatgtaatgcaa
caagttaagaatgttgcagcttctgatgctcctgtactaattacgggcgaaacagggact
ggtaaagaatatatagcgcactgtattcaccatacatcactacgaagtgacgcattgctt
gtaaaagttaattgccctgccttagcctcgagtcttttcgaaagtgagctttttgggcac
actaaaggagcatttacaggtgcttcgcagcaaagaattggcagatttgaaatggctaac
aatggaacaatttttcttgatgaaatagctgaacttccaatgccgcaacaagcaaaaata
ctacatgtacttcaagataggtgttttgaaagagtcggtgaaagtcgctcaatcagcgcc
gatttccgtattgttgcagccacaaacaaagatctgctacatgctattcataatgaatcc
tttagaagcgacctgtactatagattaaacacagcccagatacacataccttctctaaga
gaaagacctgaagatatacctgttttagttatcaatctttctgatcaaatatctaaaaga
ttgcaccgcccctctccaaaatattctgacaaagttttagaatctctttgccaataccca
tggccaggcaacgtcagagagcttaaaaactttgttcatagaatgtttttacagagatca
gctgaaaatgttaaacttagtgacgtaaaatcttatctaggcaactcacaggaaattgag
tataatgacaacaatatcttgcccatgcacgaaatggaaaaacaacacattgttaatgca
ctacgaatttgtaaaggtgttttgtctggagaaaatggagctgcttctcttttacaaatg
aaaagatctactttgcaatatcgacttaaacggcacaacataaacccatctgactataaa
gctttttaa
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