Desulforamulus ruminis: Desru_0094
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Entry
Desru_0094 CDS
T01518
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dru
Desulforamulus ruminis
Pathway
dru03030
DNA replication
dru03430
Mismatch repair
dru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desru_0094
03430 Mismatch repair
Desru_0094
03440 Homologous recombination
Desru_0094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dru03032
]
Desru_0094
03400 DNA repair and recombination proteins [BR:
dru03400
]
Desru_0094
Enzymes [BR:
dru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desru_0094
DNA replication proteins [BR:
dru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desru_0094
DNA repair and recombination proteins [BR:
dru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desru_0094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_22
AAA_30
RuvB_N
DnaX_C
AAA_5
AAA_14
AAA_7
AAA_19
TIP49
Rad17
AAA_assoc_2
AAA_18
Mg_chelatase
AAA_24
AAA_2
DUF815
AAA_16
RCF1-5-like_lid
SRP54
AAA_33
AAA_28
RNA_helicase
VapE-like_dom
TsaE
AAA_6
nSTAND3
AAA_11
PIF1
Cdc6_lid
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AEG58395
UniProt:
F6DLV2
LinkDB
All DBs
Position
101540..103183
Genome browser
AA seq
547 aa
AA seq
DB search
MTYKALYRTWRPQTFHELVGQQHITRTLQNALVNGKVAHAYLFCGPRGTGKTTTAKVLAK
ALNCLNNDLGEPCNECDNCRAVNEGTSVDVIEIDAASNRGIDEIRDLREKVKFAPATGRR
KVYIIDEVHMLTDQAFNALLKTLEEPPAHVVFVLATTEAHKVPVTILSRCQRFDFRRIKT
QEMLGRLKEVAAGAGIEVEEEALRLIAEAAEGGLRDALSILDQGAAFAEEKVSAADIHSI
LGTVQQEVLARMVRHLAEGKASLALELLAEINDRGKDLRLFARELTSHLRGLLLEGLDQK
SPAGSLQEQTLFHLLQVLVQAEQEMKWSSQPVLVLELALVKAARPEVSTSVEALARRVAQ
LEHRLESGAVEIASLPRKDLDQETQAPGPRKESPIAKVGTAGPPEKEKTVELPVKESPAA
PVKDTGIEIIRQAWPALLKGIRDGGKMRLWSVLNKNEPQIEAKGNTLTLYFEEFIDYATA
DKPESRKYLEWLLSKHFGTPWEVRCVQGKKQVPRPTSNPKDDPIYLEAVRLFGEDLVTLE
NDPESTG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
ttgacgtataaagctttgtaccgtacatggcgtccccaaacctttcatgaactggtgggc
cagcagcacataacccggaccttgcaaaatgccctggtcaacgggaaggttgctcatgct
tatttattttgcggccccaggggaaccgggaaaaccaccacggccaaagtgctggccaag
gccttaaactgcctgaacaatgacctgggagaaccctgcaatgagtgtgacaattgtcgg
gccgttaatgaaggcacgtcggtggatgtgattgaaatcgatgctgcctccaatcgtggc
atcgatgaaattcgggatttgcgggagaaagttaaatttgctccggccaccggtcgcaga
aaagtatatatcattgatgaggttcatatgctcacggaccaggcttttaatgctttatta
aaaaccctggaagaacctccggcccatgtggtttttgtactggccaccaccgaagcccat
aaggttccggtaaccattctttcccgctgccagcgttttgattttcgccgcattaaaacc
caggagatgctgggaaggctaaaagaagtggctgccggcgccggtattgaagtggaagaa
gaggctcttcggctgattgccgaggcggcggaaggaggcttgcgggatgccctgagtatt
ttggatcagggggcggcctttgcggaagaaaaggtttccgccgcagacattcacagcatc
ctgggaacggtgcagcaggaagtactggcccgcatggtgcggcatttggctgagggaaag
gcgtctttggcccttgaactgctggctgaaataaatgatcggggaaaggatttgcggctt
tttgccagggaactgacttcccatctgcggggattgctgctggaaggtttggatcaaaag
agtccggccggctctctgcaggagcagaccttgtttcacttgctgcaggtgctggtccag
gcggaacaggaaatgaagtggagttcccagccggttctggtgttggagctggctttggtt
aaagcagcccggccggaggtaagcacctctgtagaggctttggcccggcgggtggcccag
ttggaacaccggctggaaagtggagcggtggaaattgcctccctgccgcggaaggacttg
gaccaagaaacccaggcccctgggccaagaaaagagagccctatagccaaggtagggact
gccggcccgccggagaaagaaaagacggttgaactgccggtaaaagaaagtcccgcagcc
ccggtaaaggatacgggcatcgagatcatacgccaggcttggcccgccctgttaaagggc
atacgggatggtgggaaaatgaggctgtggagcgtcttaaataaaaatgaacctcaaata
gaggccaaaggcaacaccttaaccctttattttgaagaatttattgattatgcaacagca
gataaacctgagtccagaaaatatctggaatggctactctccaaacattttgggactccc
tgggaggtacgctgtgtgcagggaaaaaagcaggtgccccggccgacctctaatcctaag
gacgatcccatttacctggaggcggtccggctttttggggaagacctggtaacccttgag
aatgacccggaatcaacgggttga
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