Desulforamulus ruminis: Desru_0578
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Entry
Desru_0578 CDS
T01518
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
dru
Desulforamulus ruminis
Pathway
dru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desru_0578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dru03400
]
Desru_0578
Enzymes [BR:
dru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
Desru_0578
DNA repair and recombination proteins [BR:
dru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desru_0578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEG58863
UniProt:
F6DSP4
LinkDB
All DBs
Position
596289..596843
Genome browser
AA seq
184 aa
AA seq
DB search
MKGLPDYLAHGLKILFVGYNPGERSAVLGHHFAGRGNQFWRLLYEAGLTPRLYDPTEDGM
LKELGYGLTNLVPRPSKSSSDLSTAEMREGALELRIKVTRYKPAIVCFLGKEVYRRFAGI
SAKSGLSYGPVEGADVTQGVLAFVAPNPSGRSTILYADKLAVFIQLQTMVKAQKLRKDKS
KALG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggggttaccggattacttggctcacggccttaagatactgtttgtaggttataac
cctggagagcgctcggctgtgttagggcatcattttgccggtcgggggaatcagttttgg
cggctgctttatgaagcggggttaactccccggctttatgaccccacggaagacgggatg
ctgaaagaactgggttacggtctaaccaacctggtcccgagacccagtaaaagcagttcc
gacctctcaaccgccgagatgcgggagggagcgctggaattgaggataaaggtgacccga
tataagccggcgattgtttgttttctgggcaaagaggtttaccggcggtttgccggtatc
tcagccaagagcggcctttcatacggtccggtagaaggagcggatgtaactcagggagtc
ctagcctttgttgcgcccaaccccagtggcaggagtaccattctttacgccgataaatta
gctgtgtttattcaacttcagaccatggtaaaagcacaaaaattaaggaaagataaatcc
aaagcacttggctaa
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