Desulforamulus ruminis: Desru_1031
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Entry
Desru_1031 CDS
T01518
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
dru
Desulforamulus ruminis
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dru03019
]
Desru_1031
03009 Ribosome biogenesis [BR:
dru03009
]
Desru_1031
Messenger RNA biogenesis [BR:
dru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Desru_1031
Ribosome biogenesis [BR:
dru03009
]
Prokaryotic type
rRNA processing factors
Desru_1031
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
TRAM
RNase_E_G_Thio
KH-I_KHDC4-BBP
KH_1
RD3
zf_CopZ
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AEG59306
UniProt:
F6DL85
LinkDB
All DBs
Position
1062689..1064368
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AA seq
559 aa
AA seq
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MLKEIVINVREEETRVAVLEDKIPVEVYIERSPNQRLVGNIFKGRVENVLPGMQAAFVDI
GLEKNAFLYVEDAQPTRNPEGGNNPGITVNIGDILKQDQEIIVQIVKEPIGTKGPRVTTH
ITLPGRYLVLMPTVDYIGISRRIESEKERERLKDLANRIKPEGMGAIVRTVAESVSEEEF
RQDILLLSKLWRKIQSKASNSPAPNLLHRDLELIQRILRDVFSEDVDRLTLDSRSEYDKV
LEILDISDPKLKLKVFLDERENIFEDYGISVELEKALKRKVWLKCGAYLVIDQAEALTAV
DVNTGKFVGSTNLEDTVLKTNLEAAVEIARQLRLRNLGGIIIVDFIDMAEEEHRNLVLAT
LEEEIKKDKTKTNILGITQLGLVEMTRKKVRPSLSEVLQKHCPYCEGRGKVLSEETVSIH
LKTQICQMAKQTIADTILVEANPIVASRLIGAGGTNLRELEQKTGKNLYIRGSATHHLEE
VSIKPLSDSDEIVSQTLPVKAGEVIEVKVEETHISNTHDGIARLDGFIIDVEGGGGLIGE
VVSVEVVKVHRTYAKARLV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagaaattgtaattaacgtacgggaagaggaaacccgagtggctgtcttggag
gataagatcccggtggaggtttacatagagcggtcgcccaatcagcgcttggtgggcaac
atttttaagggccgtgtggagaatgttctgccgggcatgcaggctgcctttgttgacatc
ggtctggaaaaaaacgcctttctctatgtggaagacgctcaacccacccggaaccccgaa
gggggaaacaaccccggaataacggtaaatatcggcgacatccttaaacaggatcaagag
attattgtgcaaatcgtcaaggaacccattggtaccaaaggtcctagagtcaccacccat
attaccctgcccggaaggtatctggtgctgatgcccacggtggattatatcggcatatcc
cggcgcatcgagtcggagaaggaacgggaaagattaaaggatttggccaaccggatcaag
ccggaaggaatgggagccattgtacgcacggtggcggaaagtgtcagcgaggaagaattc
cggcaggatattttattactgagcaaactctggcgcaagattcaaagcaaagcctccaac
agtccggcacccaatttgctgcaccgggacctggaattgatccaacggatattgcgggat
gttttcagtgaagatgttgaccgtctgaccctggattcccgaagtgaatacgataaagtt
ttagagattttagatattagcgacccgaaattaaagttaaaggtttttttggatgaacgg
gagaatatttttgaggattatggaatttccgttgaattggaaaaggctttaaaaagaaag
gtttggcttaaatgcggggcttatctggtgattgatcaggccgaagcccttacggctgtg
gatgtgaataccgggaaatttgtgggcagtaccaatctggaagatacggttttaaaaacc
aacctggaagccgcagtggagattgccaggcagctcaggctgagaaatcttggcggcatt
attatcgttgattttattgatatggctgaggaagaacaccggaatttggtgctggcaacc
ctggaagaagaaattaaaaaggataaaaccaaaaccaacatcctgggcattactcaactg
ggtctggtggaaatgacccgtaaaaaggtacggccttccctgtcggaggtactgcaaaaa
cactgtccctactgtgaagggcggggcaaggtgctgtccgaagaaacggtcagcattcat
ttaaagacccagatctgccagatggcgaaacaaactatcgccgataccattctggtggaa
gccaatcccattgtggcctccaggttaatcggcgccggcggaaccaatctaagggaactg
gaacaaaaaacagggaaaaatttatacatccggggttcagcaacccaccatttggaggag
gtaagcatcaaacccctgtcggactccgatgagatcgtttctcaaacgctgccggtaaag
gccggagaagtgattgaagtgaaggtggaggaaacgcacatatccaatacccatgacggc
atcgccagactggacggctttattattgatgtggaaggcgggggcggtttgattggcgag
gtggtttcggtggaagtggtaaaggttcaccggacctacgccaaagccagactggtttga
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