Desulforamulus ruminis: Desru_1141
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Entry
Desru_1141 CDS
T01518
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
dru
Desulforamulus ruminis
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dru03016
]
Desru_1141
Enzymes [BR:
dru01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Desru_1141
Transfer RNA biogenesis [BR:
dru03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Desru_1141
Prokaryotic type
Methylthiotransferases
Desru_1141
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AEG59416
UniProt:
F6DMV8
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All DBs
Position
1175414..1176724
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AA seq
436 aa
AA seq
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MVKTAAIYTLGCKVNQYESSSIGDLFRRAGYQLLNFDRPADVYVINTCTVTHLGDRKSRQ
MIRRAIKQNPQAVIAVTGCYAQTAPGKVLEIPGVDLVIGTRDRGSIVTLVESCRKGGKPV
NAVQDIMQRADFEELPIPVDQGKTRAFLKIQEGCNSYCSYCIIPYARGPVRSRLPENVLS
SARELIEQGFREIVLTGIHIGAYGQDFAERQKDLAWLVEQLAVIPGLRRLRLGSVEPHDI
NFALIQAVAAHPNVCRHLHIPLQSGDDRILNRMKRRYNSHEFERLITVIYDNIEGVAITS
DVIVGFPGETEKNYQNTLRMVTRAKFAGIHVFKYSPRQGTPAAEFDDQVSPEEKEERSRR
LIRLGQSLAAEFAAGQIDKDLEVLVEQPFEQDDRLLEGHTDTYLKVLFPGSPSLKGEMVK
VHILGTDGAILKGTII
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaaaaccgccgccatatacacccttggctgcaaggtaaaccaatatgaatcctcg
tccattggcgacctgtttcgccgggccgggtaccagcttctgaactttgaccggccggca
gatgtttatgtcatcaatacctgtaccgtaacccatctgggagaccgcaaatccaggcaa
atgatccggcgcgccattaaacaaaatccccaggcagtcatcgccgtaacgggatgctac
gcgcaaaccgccccgggcaaagtgctggagataccgggggttgatttggtcattggcacc
cgggaccgcggcagcattgtcacactggtggagtcctgccggaaaggcgggaaaccggtc
aatgcggtgcaggatatcatgcaaagggcggattttgaggagttgcccattccagtggat
cagggcaaaaccagggccttcctgaagattcaggagggatgcaacagctattgctcctac
tgcattattccctatgcccggggccccgtacgaagccgcctgccggaaaatgttttgtct
tcggcccgggaactgattgaacagggcttccgggaaattgtgctgacgggaattcatatt
ggggcctacggccaggattttgcagagcggcagaaggatttggcctggctggtggagcag
ttggcggtgattccaggactccggagactgaggttaggctctgtggaaccccatgacatc
aactttgcccttattcaagccgtggctgctcaccccaatgtttgccgccatctgcacatc
cccctgcaaagcggggatgaccgtattctgaaccggatgaaacggcggtataattcccat
gaatttgaacggttgattacggtgatttacgataatattgagggagtagccattaccagc
gatgtgattgtgggatttcccggcgagacggaaaaaaactatcaaaacaccctgagaatg
gtcaccagggccaagtttgcggggattcatgtgtttaaatattcaccccgccagggaacg
ccggcggcggaattcgacgatcaggtctccccggaggaaaaggaagagcgcagccggcgg
ctgatccggttgggtcagagtctggcggctgaatttgctgccgggcagattgacaaggac
ctggaggtactggtagaacagccctttgaacaggatgaccgtttattggaggggcatacc
gatacctatttaaaagttctttttccgggcagcccttctttaaagggtgagatggttaaa
gtacatattctagggacggacggagccatactaaagggtacaattatttaa
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