Desulforamulus ruminis: Desru_1258
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Entry
Desru_1258 CDS
T01518
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family
KO
K02405
RNA polymerase sigma factor FliA
Organism
dru
Desulforamulus ruminis
Pathway
dru02020
Two-component system
dru02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Desru_1258
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Desru_1258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dru03021
]
Desru_1258
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dru02035
]
Desru_1258
Transcription machinery [BR:
dru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Desru_1258
Bacterial motility proteins [BR:
dru02035
]
Flagellar system
Flagellar assembly proteins
Stator
Desru_1258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
GerE
PhyR_sigma-like
PSF1_C
Motif
Other DBs
NCBI-ProteinID:
AEG59532
UniProt:
F6DNT7
LinkDB
All DBs
Position
1285054..1285809
Genome browser
AA seq
251 aa
AA seq
DB search
MLMEQAWEKFIATRDPSARHQLILHHLPLVKHLAGRVAVKLPAFIQKEDLEGYGVIGLME
ALDKFDHSMGNNFDSYAYHRIRGAMLDEVRRQNWLPRTAWQKLQLYKNTRERLEGELGQA
VSDERLAKEMGIKLDELHQLVFDANKMYLTSLDEEVSGNDGGLTRKLDLVEDINSPDPLS
IVEEKENRRLLVEAVSMLGERDQLILSLYYSDGLTLKEIGQILEVSESRVCQLHSQAMKK
LRRTVTEMLMS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgttaatggaacaggcttgggaaaagtttatagcgacccgtgatccgtccgccaggcac
cagttgattcttcaccacctgcctctggtcaagcacctggctggccgggtggcggtgaaa
ctccccgccttcattcaaaaggaggatctggaggggtatggggttatcggtttgatggag
gctttagacaagtttgatcattccatgggcaataattttgattcttacgcttatcatcgt
atccgcggcgccatgctggatgaggtccgacggcagaactggctgccccggacggcctgg
cagaaactacaactgtataaaaacacccgggaacggctggagggagagttgggacaggct
gtatccgatgaacggctggccaaagagatgggcattaagttggatgaactgcatcaactg
gtctttgatgccaataagatgtaccttacctctctggatgaggaggtttccggcaacgat
ggcggactgacccgtaagctggacctggtggaggatattaacagcccggatcccctaagc
attgtagaggaaaaggaaaaccgcagactgctggtggaagcggtgagtatgctgggagaa
agagaccaattgattttatccctatactatagcgatggattgaccctgaaagaaatcggc
cagatactggaagtttcggaatccagagtctgccagcttcacagtcaggccatgaaaaaa
ttaagaaggaccgttacggaaatgttgatgagttag
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